CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            +P +GLG  V        + AV  A+  GYRH DTA+ YG E   G AIA++   GL   R ++++ TKLW S+   D  + A + S+  L ++Y+DLYLIHWP+  K
Sbjct:   14 IPQVGLG--VWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQS---GL--DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEK 114          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y2999_MYCTA (Uncharacterized oxidoreductase MRA_2999 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2999 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            MPV+GLG A  + DE   + AV  A+++G R  DTA  YG E A+G AIA +       +REELF+TTKL   D        A + SL  L ++YVDLYLIHWP
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS-----GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP 117          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y2996_MYCBO (Uncharacterized oxidoreductase Mb2996 OS=Mycobacterium bovis GN=Mb2996 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            MPV+GLG A  + DE   + AV  A+++G R  DTA  YG E A+G AIA +       +REELF+TTKL   D        A + SL  L ++YVDLYLIHWP
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS-----GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP 117          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y2993_MYCBP (Uncharacterized oxidoreductase BCG_2993 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2993 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            MPV+GLG A  + DE   + AV  A+++G R  DTA  YG E A+G AIA +       +REELF+TTKL   D        A + SL  L ++YVDLYLIHWP
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS-----GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP 117          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y2971_MYCTU (Uncharacterized oxidoreductase Rv2971/MT3049 OS=Mycobacterium tuberculosis GN=Rv2971 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            MPV+GLG A  + DE   + AV  A+++G R  DTA  YG E A+G AIA +       +REELF+TTKL   D        A + SL  L ++YVDLYLIHWP
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS-----GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP 117          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALDX_SPOSA (Aldehyde reductase 1 OS=Sporobolomyces salmonicolor GN=ARI PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 4.097e-14
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 1
Query:  175 AIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDI 453
            AI+ GYRH D A +Y  +  +G AI EA        RE+LFIT+KLW +    + V  AL  +LK L +EY+DLYLIHWP++  P   +  ++
Sbjct:   35 AIETGYRHLDLAKVYSNQPEVGAAIKEA-----GVKREDLFITSKLWNNSHRPEQVEPALDDTLKELGLEYLDLYLIHWPVAFPPEGDITQNL 122          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.351e-14
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query:   64 PEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            P     + +    MPV+G+G A  + DE   + AV  A+++G R  DTA+ YG E A+G AIA +   G+   R ELF+TTK+  +D        A K SL  L ++YVDLYLIHWP  A
Sbjct:    7 PSAPSIALNDENTMPVLGMGVAGLSDDET--ERAVSAALEIGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPA 119          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.127e-14
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P V L+  +    +PV+G+G  V  + +   + +V  A++ GYR  DTA+ YG E A+G AIA +   G+   R+E+++TTKL   D        A + SL+ L ++YVDLYLIHWP
Sbjct:   11 IPTVTLNDDN---TLPVVGIG--VGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GI--PRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWP 118          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y1987_MYCUA (Uncharacterized oxidoreductase MUL_1987 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_1987 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.127e-14
Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 1
Query:   64 PEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            P     + +    MPV+G+G A  + DE   + AV  A+++G R  DTA+ YG E A+G A+A +   G+   R ELF+TTK+  +D        A K SL  L ++YVDLYLIHWP  A
Sbjct:    8 PSAPSIALNDENTMPVLGMGVAGLSDDET--ERAVSAALEIGCRLIDTAAAYGNEAAVGRALAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPA 120          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.192e-13
Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVAS---REELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            KMP  GLG       E   ++AV  A+  GYRH DTA++Y  E ++G         GL AS   RE++FITTKLW ++   +  + A ++S + L ++Y+DLYLIHWP
Sbjct:   16 KMPQFGLGVWQSPAGE-VTENAVNWALCAGYRHIDTAAIYKNEESVGA--------GLRASGVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWP 114          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
Y1919_MYCSJ1.078e-1440.74Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
Y2999_MYCTA1.839e-1447.12Uncharacterized oxidoreductase MRA_2999 OS=Mycobac... [more]
Y2996_MYCBO1.839e-1447.12Uncharacterized oxidoreductase Mb2996 OS=Mycobacte... [more]
Y2993_MYCBP1.839e-1447.12Uncharacterized oxidoreductase BCG_2993 OS=Mycobac... [more]
Y2971_MYCTU1.839e-1447.12Uncharacterized oxidoreductase Rv2971/MT3049 OS=My... [more]
ALDX_SPOSA4.097e-1443.01Aldehyde reductase 1 OS=Sporobolomyces salmonicolo... [more]
Y1744_MYCMM5.351e-1441.67Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
Y2407_MYCS29.127e-1438.98Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
Y1987_MYCUA9.127e-1440.83Uncharacterized oxidoreductase MUL_1987 OS=Mycobac... [more]
P100_LEIMA1.192e-1341.67Probable reductase OS=Leishmania major GN=P100/11E... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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