CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10837 contig Ccv1_Contig10837:55..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  103 MPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNGV-----WEA 501
            +PV+G G+ A + + +     A   AI++G+RH D+A LY  E  +G+AI   +  G V  RE++F T+KLWC+    +LV  AL+KSL+ LQ++YVDLY+IH P+S KP  K    +P+++   L ++ V     WEA
Sbjct:   16 IPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTV-KREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKF---VPKDESGKLIFDSVDLCHTWEA 150          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 61/149 (40.94%), Postives = 87/149 (58.39%), Query Frame = 1
Query:   70 VKLSSASGHRKMPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEED-----LVPLDYNGVWE 498
            VKL+   GH  +P +G G+     + +     A   A+ +GYRH DTA  Y  E  +G+AI   +K G+V  RE+LFITTKLWC+    +LV  AL+KSLK LQ++YVDLY++H+P+  K  +   ND P  +     L  +D+   WE
Sbjct:    8 VKLND--GHL-IPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVV-KREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGD---NDFPVNEQGKSLLDTVDFCDTWE 149          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  103 MPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            MPV+G G+ A   + +     A   AI+ G+RH D+A LY  E  +G AI   +  G V  RE++F T+KLWC+    + V  AL++SLK LQ++YVDLYLIH+P+S KP          E+L+P D NG
Sbjct:   16 MPVLGFGTYAPAEVPKNKALEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTV-KREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPG---------EELIPKDENG 135          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKL------RNDIPEEDLVPLDYNGVWEA 501
            KMP++GLG+      +  +  AV  AI LGYRH D A +Y  E  +G  + E L+ G V  RE+LFI +KLWC+D  ++LV  A + +L+ L+++Y+DLYLIHWP   KP +         N +P+E     D+   WEA
Sbjct:   12 KMPILGLGTWKSPPGK--VTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQ-GQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFKPGKDPFPLDGDGNVVPDES----DFVETWEA 144          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  103 MPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            MPV+G G+ A   + +     A   AI+ G+RH D+A LY  E  +G AI   +  G V  RE++F T+KLWC+    + V  AL++SLK LQ++YVDLYLIH+P+S KP          E+L+P D NG
Sbjct:   16 MPVLGFGTYAPAEVPKNKAIEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTV-KREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPG---------EELIPKDENG 135          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLD--YNGVWEA 501
            ++MP +GLG+      +  +K AVL A+  GYRH D A+ Y  ER +GEA+ E L  G    R+++F+T+KLW +  H D V  A ++SL  L++ Y+DLYLIHWPM+    ++L    P+  +   D  Y   W A
Sbjct:   11 QRMPTVGLGTWKSAPGQ--VKQAVLAALDCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWPMAFGRGDELIPRHPDGTIQYDDTHYRDTWAA 145          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20
Identity = 59/140 (42.14%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK------PSEKLRNDIPEEDLVPLDYNGVWEA 501
            KMP++GLG+      +  +  AV  AI LGYRH D A +Y  E  +G A+ E LK  +V  REELFI +KLWC+   + LV  A +K+L  L+++Y+DLYLIHWP   K      P +   N IP +     D+   WEA
Sbjct:   12 KMPILGLGTWKSPPGQ--VTEAVKTAIDLGYRHIDCAHVYQNENEVGVALQEKLKEQVV-KREELFIVSKLWCTSHDKSLVKGACQKTLNDLKLDYLDLYLIHWPTGFKHGSEYFPLDAAGNVIPSD----TDFLDTWEA 144          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20
Identity = 53/138 (38.41%), Postives = 86/138 (62.32%), Query Frame = 1
Query:   88 SGHRKMPVIGLGSAVDNIDE-RAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNGVWE 498
            SGH  MP +GLG+     D   ++++A+ EA   GYRH DTA+ YG E+ +G+ +  A++ G+   R++LF+T+K+WC++   + V  AL+ +LK LQ++Y+DLY IHWP   K    +  +  E  ++  D  GVW+
Sbjct:   20 SGHA-MPAVGLGTWRAGSDTAHSVRTAITEA---GYRHVDTAAEYGVEKEVGKGLKAAMEAGI--DRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGE--VLEFDMEGVWK 149          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20
Identity = 54/109 (49.54%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKP 429
            +P +GL S         +  AV EAI  GYRHFD A  Y  ER +G  I   +K G V  RE+LFI TKLWC+   + LV  A +KSLK L++ Y+DLYLIHWPM  KP
Sbjct:    4 IPAVGLSSW--KASPGKVTEAVKEAIDAGYRHFDCAYFYHNEREVGAGIRCKIKEGAVR-REDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIHWPMGFKP 109          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_CRIGR (Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricetulus griseus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  109 VIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEED 465
            +IGLG+   N  +  +K+A+  A+ +GYRH D A++YG E  +GEA+ E +  G    REELF+T+KLW +  H + V  AL+K+L  LQ+EY+DLYL+HWP +    E+  N  P+ D
Sbjct:    1 LIGLGTWKSNPGQ--VKAAIKYALSVGYRHIDCAAVYGNEIEIGEALKENVGPGKAVPREELFVTSKLWNTKHHPEDVEAALRKTLADLQLEYLDLYLMHWPYA---FERGDNPFPKND 114          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PGFS1_BOVIN7.709e-2140.29Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
AK1CD_MOUSE7.709e-2140.94Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]
AK1C1_MACFA7.709e-2143.08Aldo-keto reductase family 1 member C1 homolog OS=... [more]
ALDR_PIG1.007e-2040.71Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
AK1C1_MACFU1.007e-2043.08Aldo-keto reductase family 1 member C1 homolog OS=... [more]
A1A1A_DANRE1.007e-2039.42Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
ALDR_RABIT1.315e-2042.14Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
ALDR_HORVU1.717e-2038.41Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
AKCL2_HUMAN1.717e-2049.541,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]
AK1A1_CRIGR1.717e-2043.70Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricet... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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