CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10837 contig Ccv1_Contig10837:55..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-19
Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            KMP +GLG+      +  +  AV  AI +GYRH D A +Y  E+ +G A+ E LK  +V  R++LFI +KLWC+   + +V  A +K+L  LQ++Y+DLYLIHWP   KP           D  PLD +G
Sbjct:   12 KMPTLGLGTWKSPPGQ--VTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVV-KRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPG---------PDYFPLDASG 129          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1C2_HUMAN (Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-19
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKL----GYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            MPV+G G+          KS  LEA+KL    G+ H D+A +Y  E  +G AI   +  G V  RE++F T+KLW +    +LV  AL++SLK LQ++YVDLYLIH+P+S KP          E+++P D NG
Sbjct:   16 MPVLGFGTYAP---AEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSV-KREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG---------EEVIPKDENG 135          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1BA_HUMAN (Aldo-keto reductase family 1 member B10 OS=Homo sapiens GN=AKR1B10 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-19
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEED 465
            KMP++GLG+    + +  +K AV  AI  GYRH D A +Y  E  +GEAI E ++   V  RE+LFI +KLW +   R LV +A +K+LK L++ Y+D+YLIHWP   K  + L    P++D
Sbjct:   12 KMPIVGLGTWKSPLGK--VKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAV-KREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDL---FPKDD 127          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-19
Identity = 51/137 (37.23%), Postives = 81/137 (59.12%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDL--VPLDYNGVWEA 501
            +K+P+IGLG+      +  +K AV  A+ +GYRH D A+ Y  E  +G+A  E +    V  RE+LF+T+KLW +  H + V  AL+K+L  L+++Y+DLYL+HWP + +  + L    P+  +     DY   W+A
Sbjct:   14 QKIPLIGLGTWKSEPGQ--VKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPHAFERGDNLFPKNPDGTMRYDYTDYKDTWKA 148          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: GCY_YEAST (Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.239e-19
Identity = 55/127 (43.31%), Postives = 75/127 (59.06%), Query Frame = 1
Query:   73 KLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDI 453
            K+ S +   ++P IGLG+      E     AVL A+K GYRH DTA++Y  E  +G+AI ++        REE+F+TTKLWC+  H   V  AL +SLK L ++YVDLYL+HWP    P+     DI
Sbjct:   10 KILSLNTGAQIPQIGLGTWQSK--ENDAYKAVLTALKDGYRHIDTAAIYRNEDQVGQAIKDS-----GVPREEIFVTTKLWCTQHHEPEV--ALDQSLKRLGLDYVDLYLMHWPARLDPAYIKNEDI 127          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.239e-19
Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 1
Query:  103 MPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNGV-----WEA 501
            MP++GLG+ A  ++ +   + AV  AI +GYRH D A + G E  +G  I   +  G V  RE++F T KLWC+    D+V + L++SL+ + ++Y+DL+L+HWP+S KPS       P +   P  Y+ V     WEA
Sbjct:   17 MPILGLGTYAAPDVPKSLAEEAVKTAIDVGYRHIDCAFITGNEMHIGNGIRSKISDGTV-KREDIFYTGKLWCTYFSPDMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGA---SDPSDKDKPFIYDNVDLCATWEA 151          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALD2_MOUSE (Aldose reductase-related protein 2 OS=Mus musculus GN=Akr1b8 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.239e-19
Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEED 465
            KMP++GLG+     ++  +K AV  AI  GYRH D A  Y  E  +GEAI E +K   V  RE+LFI +KLW +   + L+  A +K+L  L+++Y+DLYLIHWP   +P ++L    P++D
Sbjct:   12 KMPIVGLGTWKSPPNQ--VKEAVKAAIDAGYRHIDCAYAYCNENEVGEAIQEKIKEKAV-QREDLFIVSKLWPTCFEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKEL---FPKDD 127          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.239e-19
Identity = 55/140 (39.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query:  103 MPVIGLGS--AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEED-----LVPLDYNGVWEA 501
            +P +G G+   ++    +AM++A L AI +GYRH DTA  Y  E  +G+AI   +K G+V  RE++FITTKLWC+    +LV  +L+K    LQ+E+VDL+++H+P+  K  +   ND P ++     L  +D+   WEA
Sbjct:   16 IPALGFGTYKPIEVPKSKAMEAANL-AIGVGYRHIDTAYAYQIEEEIGQAIQSNIKAGIV-KREDMFITTKLWCTCFQPELVRPSLEKXXXKLQLEHVDLFIMHYPVPMKAGD---NDFPLDEQGKLLLDTVDFCATWEA 150          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALD2_CRIGR (Aldose reductase-related protein 2 OS=Cricetulus griseus GN=AKR1B8 PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 4.230e-19
Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEED 465
            KMP++GLG+      +  +K AV  AI  GYRH D A  Y  E  +GEAI E +K   V  RE+LFI +KLW +   R L+  A +K+L  L+++Y+DLYLIHWP   +P ++L    P++D
Sbjct:   12 KMPIVGLGTWQSPPGQ--VKEAVKVAIDAGYRHIDCAYAYYNEHEVGEAIQEKIKEKAVR-REDLFIVSKLWPTCFERKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKEL---FPKDD 127          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19
Identity = 65/143 (45.45%), Postives = 85/143 (59.44%), Query Frame = 1
Query:   67 EVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLV--PLDYNG 489
            E+  S  +G R +P +GLG+A  +      K AV  AIK GYRH DTA  Y TE  +GEAI E L+ G +  RE+LFITTK+W      D V R+L +SLK L +EYVDL L HWP+     EK+++      LV  P+D +G
Sbjct:   22 EIYFSLNNGVR-IPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSI-KREDLFITTKVW--PVLWDEVDRSLNESLKALGLEYVDLLLQHWPLC---FEKIKDPKGISGLVKTPVDDSG 157          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
ALDR_RAT1.899e-1941.54Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]
AK1C2_HUMAN1.899e-1942.11Aldo-keto reductase family 1 member C2 OS=Homo sap... [more]
AK1BA_HUMAN1.899e-1943.44Aldo-keto reductase family 1 member B10 OS=Homo sa... [more]
AK1A1_CHICK2.480e-1937.23Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
GCY_YEAST3.239e-1943.31Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE... [more]
CRO_RANCA3.239e-1938.13Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]
ALD2_MOUSE3.239e-1942.62Aldose reductase-related protein 2 OS=Mus musculus... [more]
AK1CD_MESAU3.239e-1939.29Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
ALD2_CRIGR4.230e-1943.44Aldose reductase-related protein 2 OS=Cricetulus g... [more]
ARA1_YEAST7.215e-1945.45D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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