CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10837 contig Ccv1_Contig10837:55..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALRC_DICDI (Aldose reductase C OS=Dictyostelium discoideum GN=alrC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17
Identity = 55/166 (33.13%), Postives = 90/166 (54.22%), Query Frame = 1
Query:   22 MAANSEPMHVSINVPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPS-------EKLRNDIPEEDLVPLDYNGVWE 498
            M  N+   + + N    KL+  +   ++P IGLG+     +   +  A+  A+K GYRH D A+ YG E+ +G ++ E  K G +  RE++F T+KLW S  + +LVV+   K+++ L I Y+DLYLIHWP++ + S       E LR+      + P+     W+
Sbjct:    1 MFQNNYNNNTNYNNNNFKLNDGN---QIPSIGLGTYYSE-NPGEVGDAINNALKNGYRHIDGAAFYGNEKVIGNSLKEIFKEGEI-KREDIFYTSKLWNSCHNSNLVVKHCVKTIEDLGIGYLDLYLIHWPIAFENSNPLGLTIEPLRDQNGNPIIAPVSIRETWQ 161          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17
Identity = 55/147 (37.41%), Postives = 82/147 (55.78%), Query Frame = 1
Query:   82 SASGHR-------KMPVIGLG--SAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNGVW 495
            SA+ HR        +P+IGLG  S   +  + A  ++V  AI  GYRH D A +Y  E  +GEAI E +  G V  RE++F   KLW ++   ++V   L+++L+ LQ++YVDLY+I  PM+ KP          +++ P D NG W
Sbjct:    4 SAASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVR-REDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPG---------DEIYPRDENGKW 140          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.777e-17
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMS 420
            +P V L+  +    MPVIGLG  V  + +   + AV  A++ GYR  DTA+ YG E A+G AIA +        R+ELF+TTKL   DA       AL+ SL+ L ++YVDLYLIHWP+S
Sbjct:    7 IPTVTLNDDN---TMPVIGLG--VGELSDAETEQAVTAALEAGYRLIDTAAAYGNEAAVGRAIAAS-----GVPRDELFVTTKLATEDAGFQSSQDALRASLERLGLDYVDLYLIHWPVS 116          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 2.321e-17
Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P  GLG+    + +  + S+V+ A++LGYR  DTA +Y  E A+G+AIAE+        R EL+ITTK+W  +  +D ++ +LK+SL+ L+ +YVDL LIHWP
Sbjct:    3 IPAFGLGTF--RLKDDVVISSVITALELGYRAIDTAQIYDNEAAVGQAIAES-----GVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP 99          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: YTBE_BACSU (Uncharacterized oxidoreductase ytbE OS=Bacillus subtilis GN=ytbE PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERA-MKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLR 444
            +MP  GLG  V  ++E + + +AV  AI  GYR  DTA++YG E  +GE I E ++   + SRE+LFIT+K+W +D   +  + A + SL  L ++Y+DLYLIHWP+  K  E  R
Sbjct:   16 EMPWFGLG--VFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGI-SREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGKYKEAWR 128          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17
Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            +P  KL++     +MP IG G     +D+      V  AIK GYR FD A  YG E+ +GE +  A+  G+V +REE+F+T+KLW +      V  AL K+LK L+++YVDL+LIH+P++ K
Sbjct:    6 IPAFKLNNGL---EMPSIGFGCW--KLDKSTAADQVYNAIKAGYRLFDGAEDYGNEQEVGEGVKRAIDEGIV-TREEIFLTSKLWNNYHDPKNVETALNKTLKDLKVDYVDLFLIHFPIAFK 121          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGA_ECO57 (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli O157:H7 GN=dkgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17
Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            MP +GLG  V       + +A+ +A+++GYR FDTA+ Y  E  +G+A+  A       +REELFITTKLW  D +R     AL  SLK LQ++Y+DLYL+HWP+ A
Sbjct:   15 MPQLGLG--VWQASNEEVITAIQKALEVGYRSFDTAAAYKNEEGVGKALKNAS-----VNREELFITTKLWNDDHNRPR--EALLDSLKKLQLDYIDLYLMHWPVPA 112          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.959e-17
Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 1
Query:   70 VKLSSASGH------RKMPVIGLGSAVDNIDERAMKS-AVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            + LS+A+ H        +P+IGLG+  D          AV  AI  GYRH D A +Y  E  +GEAI E +  G V  REE+F   KLW +D   ++V  AL+++L+TL+++Y+DLY+I  PM+ KP          E+  P D NG
Sbjct:    1 MNLSTANHHIPLNDGNSIPIIGLGTYSDPRPVPGKTFIAVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKV-KREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMPMAFKPG---------EEFYPKDENG 137          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17
Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 1
Query:   64 PEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKP 429
            P VKL+S     ++P++G G     +        +  AIK GYR FD A  Y  E+ +GE I  A+K G+V  REELFIT+KLW S   +  V  AL K+L  L ++YVDL+ IH+P++ KP
Sbjct:    8 PAVKLNSGY---EIPLVGFGCW--KLTNDVASDQIYRAIKSGYRLFDGAEDYANEQEVGEGIKRAIKEGIV-KREELFITSKLWNSFHDKKNVEVALMKTLSDLNLDYVDLFYIHFPIAQKP 123          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGB_SALTY (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhimurium GN=dkgB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17
Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P  GLG+    + +  + ++V  A++LGYR  DTA +Y  E A+G+AIAE+        R EL+ITTK+W  +  +D ++ +LK+SLK L+ +YVDL LIHWP
Sbjct:    3 IPAFGLGTF--RLKDDVVIASVKTALELGYRAVDTAQIYDNEAAVGQAIAES-----GVPRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWP 99          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
ALRC_DICDI1.361e-1733.13Aldose reductase C OS=Dictyostelium discoideum GN=... [more]
AK1D1_HUMAN1.361e-1737.413-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
Y4205_MYCGI1.777e-1745.00Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]
DKGB_ECOLI2.321e-1743.272,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
YTBE_BACSU3.031e-1743.10Uncharacterized oxidoreductase ytbE OS=Bacillus su... [more]
XYL1_CANSH3.031e-1741.80NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
DKGA_ECO573.031e-1745.792,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
AK1D1_RAT3.959e-1738.783-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
XYL1_CANPA6.753e-1742.62NADH-dependent D-xylose reductase OS=Candida parap... [more]
DKGB_SALTY6.753e-1743.272,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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