CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10837 contig Ccv1_Contig10837:55..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGB_SALTI (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhi GN=dkgB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17
Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P  GLG+    + +  + ++V  A++LGYR  DTA +Y  E A+G+AIAE+        R EL+ITTK+W  +  +D ++ +LK+SLK L+ +YVDL LIHWP
Sbjct:    3 IPAFGLGTF--RLKDDVVIASVKTALELGYRAVDTAQIYDNEAAVGQAIAES-----GVPRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWP 99          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: XYL1_PICGU (NADPH-dependent D-xylose reductase OS=Pichia guilliermondii GN=XYL1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 8.820e-17
Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            +MP +G G     +D+      +  AIK+GYR FD A  YG E+ +GE I  AL  GLVA R+ELF+ +KLW S      V +AL ++L  L+++Y+DL+LIH+P++ K
Sbjct:   10 EMPSVGFGCW--KVDKATCADTIYNAIKVGYRLFDGAEDYGNEKEVGEGINRALDEGLVA-RDELFVVSKLWNSFHDPKNVEKALDRTLSDLKVDYLDLFLIHFPIAFK 115          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 8.820e-17
Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPM---SAKPS----EKLRNDIPEEDLVPLDYNGVWE 498
            +P+IGLG+  +      +  AV  A+K GYRH D A++Y  E+ +G A+ E    G +  RE++F  +KLW S  H  LV +  +K+L+ L +EY+DLYLIHWP+   +A PS    + LR+   E  L  +     W+
Sbjct:   17 IPMIGLGT-YNGAKVGEVGDAVKVALKSGYRHIDGAAIYMNEKEIGHALKEVFAEGEI-KREDIFYVSKLWNSCHHASLVRKHCEKTLEDLGLEYLDLYLIHWPIAFENADPSGTTTQPLRDSDGEPVLAAVSIRETWQ 153          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 1
Query:   97 RKMPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            RK+P IG+G   ++N  +      V  AIK GYR FD A  YG E+ +GE I  A+K GLV  R++LFIT+KLW +   ++ V +AL KSL    ++Y DLYL+H+P+S K
Sbjct:   12 RKIPAIGMGCWKLENAADM-----VYAAIKEGYRLFDCACDYGNEKEVGEGINRAIKDGLV-KRKDLFITSKLWNNFHAKENVKKALMKSLSDFNLDYFDLYLMHFPISFK 116          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            MP +GLG  V       + +A+ +A+++GYR  DTA+ Y  E    E + +ALK   VA REELFITTKLW  D  R     AL++SLK LQ++Y+DLYL+HWP+ A
Sbjct:   15 MPQLGLG--VWKASNEEVIAAIHKALEVGYRSIDTATAYQNE----EGVGKALKAASVA-REELFITTKLWNDDQKRPR--EALQESLKKLQLDYLDLYLMHWPVPA 112          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            MP +GLG  V       + +A+ +A+++GYR  DTA+ Y  E    E + +ALK   VA REELFITTKLW  D  R     AL++SLK LQ++Y+DLYL+HWP+ A
Sbjct:   15 MPQLGLG--VWKASNEEVIAAIHKALEVGYRSIDTATAYQNE----EGVGKALKAASVA-REELFITTKLWNDDQKRPR--EALQESLKKLQLDYLDLYLMHWPVPA 112          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16
Identity = 50/130 (38.46%), Postives = 77/130 (59.23%), Query Frame = 1
Query:   64 PEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDI 453
            P  KLSS  GH K+P++G G+     +   +  AV  A+  GYRH D A++Y  E+ +GEA  +         RE++FIT+KLW +   ++ V  AL+++L  L ++Y+DLYL+HWP++    E   NDI
Sbjct:    3 PSFKLSS--GH-KIPLVGFGTW--KAETTLVGKAVEVALDAGYRHIDCAAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWPVA---FEYTSNDI 124          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.965e-16
Identity = 43/104 (41.35%), Postives = 72/104 (69.23%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +PV GLG+    + ++ +  +V +A+ LGYR  DTA +Y  E  +G+AI E+   G+  +R+ELFITTK+W ++  +D ++ +L++S++ L+ +YVDL LIHWP
Sbjct:    3 IPVFGLGTF--RLQDQIVIDSVSQALTLGYRAIDTAQIYENEAPVGQAIQES---GI--NRDELFITTKIWIANLSKDKLIPSLRESIQKLKTDYVDLTLIHWP 99          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.566e-16
Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            MPVIGLG  V  + +   + +VL A++ GYR  DTA+ YG E A+G AIA++        R ELF+TTKL   D        AL+ SL+ L ++YVDLYLIHWP  ++
Sbjct:   18 MPVIGLG--VGELSDAEAEQSVLAALEAGYRLIDTAAAYGNEAAVGRAIAKS-----GVPRGELFVTTKLATDDLGFQSSQDALRASLERLGLDYVDLYLIHWPAGSQ 118          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.566e-16
Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P  GLG+    + +  + S+V  A++LGYR  DTA +Y  E A+G AIAE+        R EL+ITTK+W  +  +D ++ +LK+SL+ L+ +YVDL LIHWP
Sbjct:    3 IPAFGLGTF--RLKDDVVISSVKTALELGYRAIDTAQIYDNEAAVGLAIAES-----GVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP 99          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
DKGB_SALTI6.753e-1743.272,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
XYL1_PICGU8.820e-1743.12NADPH-dependent D-xylose reductase OS=Pichia guill... [more]
ALRB_DICDI8.820e-1737.41Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
XYL1_PACTA1.152e-1645.95NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
DKGA_SALTY1.152e-1647.662,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
DKGA_SALTI1.152e-1647.66Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
ALRA_DICDI1.504e-1638.46Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
DKGB_YERPE1.965e-1641.352,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]
Y2161_MYCVP2.566e-1645.37Uncharacterized oxidoreductase Mvan_2161 OS=Mycoba... [more]
DKGB_ECO572.566e-1643.272,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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