CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10837 contig Ccv1_Contig10837:55..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 2.566e-16
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            MP +GLG  V       + +A+ +A+++GYR  DTA+ Y  E  +G+A+  A       +REELFITTKLW  D  R     AL  SLK LQ++Y+DLYL+HWP+ A
Sbjct:   15 MPQLGLG--VWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNAS-----VNREELFITTKLWNDDHKRPR--EALLDSLKKLQLDYIDLYLMHWPVPA 112          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 4.377e-16
Identity = 49/123 (39.84%), Postives = 73/123 (59.35%), Query Frame = 1
Query:   55 INVPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            + VP + L+  +    +P +G G  V  +     + AV EA+++GYRH DTA++YG E  +G AIA +   G+  +R++LFITTKLW      D    A+ +SL  L ++ VDLYL+HWP  A
Sbjct:    1 MTVPSIVLNDGNS---IPQLGYG--VFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---GI--ARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPA 113          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AKCL1_HUMAN (Aldo-keto reductase family 1 member C-like protein 1 OS=Homo sapiens GN=AKR1CL1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.377e-16
Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 1
Query:  103 MPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPS 432
            MPV+G G+ A D+  +     A   AI +G+RH D+A LY  E  +G+AI E +  G V  REE+F T KLW +    +LV  AL++SLK L  +YVDL++IH P + K S
Sbjct:   19 MPVLGFGTYAPDHTPKSQAAEATKVAIDVGFRHIDSAYLYQNEEEVGQAIWEKIADGTV-KREEIFYTIKLWATFFRAELVHPALERSLKKLGPDYVDLFIIHVPFAMKGS 128          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.717e-16
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 1
Query:  100 KMPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLR 444
            +MP  GLG   V+N +E     +V  AIK GYR  DTA++Y  E  +G  I E+       +REELFIT+K+W  D   +  + A +KSL+ LQ++Y+DLYLIHWP   K  +  R
Sbjct:   16 EMPWFGLGVFKVENGNEAT--ESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES-----GVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDKYKDTWR 124          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y4483_MYCA1 (Uncharacterized oxidoreductase MAV_4483 OS=Mycobacterium avium (strain 104) GN=MAV_4483 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.466e-16
Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P V L+  +   KMPV+GLG A   + +   +S+VL A++ G R  DTA+ YG E A+G AIA +   G+   REELF+TTKL  S         + K+SL  L ++Y+DLYLIHWP
Sbjct:   14 IPTVALNDEA---KMPVLGLGVA--KLSDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIAAS---GI--PREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWP 121          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.466e-16
Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 1
Query:   82 SASGHRKMPVIGLGSAVDNIDERAMKS-AVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            S S    +P+IGLG+  D          AV  AI  GYRH D A +Y  E  +GEAI E +  G V  REE+F   KLW ++    +V+ AL+++LK L+++Y+DLY+I  PM+ KP          +++ P D NG
Sbjct:   11 SLSDGNNIPLIGLGTYSDPRPVPGKTYVAVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKV-KREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPG---------KEIYPRDENG 137          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 9.752e-16
Identity = 55/121 (45.45%), Postives = 68/121 (56.20%), Query Frame = 1
Query:   64 PEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            P VKL+S      MP++G G    N D  A    +  AIK GYR FD A  YG E   G+ IA A+K GLV  REELFI +KLW S    D V    +K L    I+Y DLY++H+P+S K
Sbjct:    4 PTVKLNSGYD---MPLVGFGLWKVNNDTCA--DQIYHAIKEGYRLFDGACDYGNEVEAGQGIARAIKDGLV-KREELFIVSKLWNSFHDGDRVEPICRKQLADWGIDYFDLYIVHFPISLK 118          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.274e-15
Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  103 MPVIGLGS--AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            +PV+G G+  +VDN    +    V+ A+K GYRH D A++Y  E  +G AI ++        REE+FITTKLW ++  RD    AL KSLK L ++YVDLYL+HWP+  K
Sbjct:   20 IPVLGFGTWRSVDNNGYHS----VIAALKAGYRHIDAAAIYLNEEEVGRAIKDS-----GVPREEIFITTKLWGTE-QRDPEA-ALNKSLKRLGLDYVDLYLMHWPVPLK 118          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.663e-15
Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 1
Query:   64 PEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            P +KL+S      MP +G G  +  +D       V  AIK GYR FD A  YG E+  GE +A A+K GLV  RE+LFI +KLW +    D V    ++ L   QI+Y DL+L+H+P
Sbjct:    4 PTLKLNSGYD---MPQVGFG--LWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLV-KREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFP 114          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y4149_MYCPA (Uncharacterized oxidoreductase MAP_4149 OS=Mycobacterium paratuberculosis GN=MAP_4149 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.706e-15
Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P V L+  +   K PV+GLG A   + +   +S+VL A++ G R  DTA+ YG E A+G AIA +   G+   REELF+TTKL  S         + K+SL  L ++Y+DLYLIHWP
Sbjct:   14 IPTVALNDEA---KKPVLGLGVA--KLSDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIAAS---GI--PREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWP 121          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
DKGA_ECOLI2.566e-1644.862,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
DKGA_CORSC4.377e-1639.842,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
AKCL1_HUMAN4.377e-1644.14Aldo-keto reductase family 1 member C-like protein... [more]
GR_BACSU5.717e-1643.10Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
Y4483_MYCA17.466e-1644.07Uncharacterized oxidoreductase MAV_4483 OS=Mycobac... [more]
AK1D1_MOUSE7.466e-1638.693-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
XYL1_ASPNG9.752e-1645.45NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]
YPR1_YEAST1.274e-1545.45Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
XYL1_TRIRE1.663e-1541.88NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
Y4149_MYCPA3.706e-1543.22Uncharacterized oxidoreductase MAP_4149 OS=Mycobac... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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