CX289075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.744e-23 Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLA-------TSSKNNDEVDGKAGSSA--------LFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESK 508 KAQVVGWPP+RSFRKN ++ +++ ND+ G +G+++ +VKVSMDGAPYLRK+DLK Y YQ+LS+AL KMFS FTIG YG G ++ ++ESK Sbjct: 68 KAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESK 174
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.341e-23 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSS--KNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGS 469 KAQVVGWPPIRS+RKN++AT+ N ++VD K G L+VKVSMDGAPYLRKVDLK Y Y+++S LEKMF F+ G+ G+ Sbjct: 121 KAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGA 203
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.423e-22 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSS--KNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYG 466 KAQVVGWPPIRS+RKN++AT+ + ++ + K G L+VKVSMDGAPYLRKVDLK Y Y++LS+ALEKMF FT G+ G Sbjct: 114 KAQVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDG 195
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.061e-22 Identity = 57/103 (55.34%), Postives = 70/103 (67.96%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLA---TSSKNNDEVDGKAGS------SALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESK 508 KAQVVGWPP+R++RKN + TSS + KAG+ A VKVSMDGAPYLRKVDLK Y YQ+LS AL KMFS FT+G YG+ G + + ++ESK Sbjct: 80 KAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESK 180
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 8.632e-20 Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYG 466 KAQVVGWPP+RS+RKN + + K++ + +A FVKVSMDGAPYLRK+DL+ Y Y ELS+AL MFS FT+G++G Sbjct: 80 KAQVVGWPPVRSYRKNVMVSCQKSSGGPE-----AAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHG 154
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.284e-19 Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGAL 481 KAQVVGWPP+RSFRKN LA K +A VKVSMDGAPYLRK+D+ Y Y ELS A + MF+ FTIG+ GSH L Sbjct: 98 KAQVVGWPPVRSFRKNVLAEKCK-----------AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQL 171
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.627e-18 Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSL-------------ATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIG 457 KAQVVGWPP+RS+RK+ L A ++ + + AG+ LFVKVSMDGAPYLRK+DLK Y Y+EL ALE MF CF+ G Sbjct: 51 KAQVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGG 140
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.736e-18 Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSL---ATSSKNNDEVD---------GKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFT 451 KAQ VGWPP+RSFR+N + + SK +E D +S+ FVKVSMDGAPYLRKVDLK Y+ Y++LS AL+KMF FT Sbjct: 84 KAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT 170
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.736e-18 Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSL---ATSSKNNDEVD---------GKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFT 451 KAQ VGWPP+RSFR+N + + SK +E D +S+ FVKVSMDGAPYLRKVDLK Y+ Y++LS AL+KMF FT Sbjct: 84 KAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT 170
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.378e-17 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQY 463 KAQ+VGWPP+RS+RKN++ S KN E +G+ ++VKVSMDGAPYLRK+DL Y Y EL ALE MF F++G+Y Sbjct: 62 KAQIVGWPPVRSYRKNNIQ-SKKNESEHEGQG----IYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEY 134 The following BLAST results are available for this feature:
BLAST of CX289075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289075 ID=CX289075; Name=CX289075; organism=Citrus clementina; type=EST; length=509bpback to top |