CX289075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 5.419e-14 Identity = 41/79 (51.90%), Postives = 48/79 (60.76%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQY 463 K Q+VGWPP+RS RKN+ +S +VKVSMDGAPYLRK+DLK Y Y EL ALE MF IG+Y Sbjct: 58 KTQIVGWPPVRSSRKNN----------------NSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVM-IGEY 119
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.078e-14 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSL--------ATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFS-CFT 451 KAQVVGWPP+R++R+N+ AT +++ + L+VKVSMDGAPYLRKVDLK Y+EL AL+ +F+ CF+ Sbjct: 86 KAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFS 169
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.022e-12 Identity = 46/100 (46.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 236 VVGWPPIRSFRKNSLATSS------KNNDEVDGKAG---SSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESK 508 VVGWPPIRSFR+N SS + NDE D KA VK++MDG P RKVDL+ Y YQ+LSSA+E++F F Q A E +E K Sbjct: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDK 267
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.335e-12 Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCF 448 K+QVVGWPP+ S+RK + S N G+S ++VKVSMDGAP+LRK+DL + Y +L+ AL+K+F C+ Sbjct: 62 KSQVVGWPPVCSYRKKN----SMNE-------GASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCY 124
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.884e-12 Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSC 445 K QVVGWPP+ S+RK ++ SK +++KVSMDGAPYLRK+DL + Y EL+ ALEK+F C Sbjct: 53 KNQVVGWPPVCSYRKKNMNEGSK-------------MYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDC 112
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTI 454 K QVVGWPP+ S+RK + K L+VKVSMDGAP+LRK+DL + Y +L+ AL+K F C+ I Sbjct: 57 KNQVVGWPPVCSYRKKNTVNEPK-------------LYVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCYGI 119
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRK-NSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCF 448 K QVVGWPP+ S+RK NS+ +SK ++VKVSMDGAP+LRK+DL + Y +L+ ALEK+F C+ Sbjct: 62 KNQVVGWPPVCSYRKKNSVNEASK-------------MYVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCY 123
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIG 457 K+Q VGWPP+ S+R+ KNN+E G +VKVSMDG PY+RK+DL + + Y L + LE +F C IG Sbjct: 68 KSQAVGWPPVCSYRRK------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG 134
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.476e-11 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 230 AQVVGWPPIRSFRKNSLATSSKNNDEVDGK-------AGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMF 439 A VVGWPP+RSFR+N ++SS + G+ G A FVKV+MDG P RKVDL + Y ELS+A++++F Sbjct: 56 APVVGWPPVRSFRRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLF 132
BLAST of CX289075 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 3.288e-11 Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 227 KAQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCF 448 K+QVVGWPP+ S+R+ + +K++ +VKVS+DGA +LRK+DL+ Y YQ+L+SAL+ +F C+ Sbjct: 51 KSQVVGWPPVCSYRRKNSLERTKSS------------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCY 112 The following BLAST results are available for this feature:
BLAST of CX289075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289075 ID=CX289075; Name=CX289075; organism=Citrus clementina; type=EST; length=509bpback to top |