CX289077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 SGK+ L LL L+ R++L T+ +DL + R Y Y RLDG+T + R+ V F + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1417 SGKLAKLDELLRELKAG-GHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQ-RPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1531
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_CRYNE (Putative DNA helicase INO80 OS=Cryptococcus neoformans GN=INO80 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 44/113 (38.94%), Postives = 68/113 (60.18%), Query Frame = 3 Query: 213 LARLLGHLRQRT--DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 LARL LR+ R++L T+ +DL + R+Y YLRLDG++ I++R+ +V + + D F F LS++AGG G+NL + ++ +D DWNP++D QA R R G Sbjct: 1455 LARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEYLIFRQYKYLRLDGSSPIAERRDMVTSWQT-NPDIFVFCLSTRAGGLGINLTAADTVIFYDHDWNPSSDAQAMDRAHRVG 1566
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_ASPTN (Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ino80 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 SGK+ L LL L+ R++L T+ +DL + R Y Y RLDG+T + R+ V F + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1398 SGKLAKLDELLRELKAG-GHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQ-RPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1512
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_ASPOR (Putative DNA helicase ino80 OS=Aspergillus oryzae GN=ino80 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 SGK+ L LL L+ R++L T+ +DL + R Y Y RLDG+T + R+ V F + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1215 SGKLAKLDELLRELKAG-GHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQ-RPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1329
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_ASPNC (Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ino80 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 SGK+ L LL L+ R++L T+ +DL + R Y Y RLDG+T + R+ V F + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1405 SGKLAKLDELLRELKAG-GHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQ-RPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1519
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_ASPFU (Putative DNA helicase ino80 OS=Aspergillus fumigatus GN=ino80 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 SGK+ L LL L+ R++L T+ +DL + R Y Y RLDG+T + R+ V F + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1417 SGKLAKLDELLRELKAG-GHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQ-RPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1531
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_ASHGO (Putative DNA helicase INO80 OS=Ashbya gossypii GN=INO80 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 S K+ L LL L+ + R+++ T+ +DL + R+Y ++RLDG++ + R+ LV+ + S D F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1239 SAKLKKLDELLVRLKAG-EHRVLIYFQMTRMMDLIEEYLTYRQYKHIRLDGSSKLEDRRDLVHDWQTKS-DIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLG 1353
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: SWR1_YARLI (Helicase SWR1 OS=Yarrowia lipolytica GN=SWR1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.195e-14 Identity = 45/116 (38.79%), Postives = 63/116 (54.31%), Query Frame = 3 Query: 198 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 GK+ LA LL L R ++ + T+ LD+ Q Y+RLDG T I +RQ L FN K F+LS+++GG G+NL G + ++ +D DWNP+ DKQ R R G Sbjct: 1469 GKLQRLATLLQDLIAG-GHRALIFTQMTKVLDVLEQFLNIHGLRYMRLDGATKIEQRQLLTERFNTDPKIP-VFILSTRSGGLGINLTGADTVIFYDSDWNPSMDKQCQDRCHRIG 1582
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: YFK8_YEAST (Uncharacterized ATP-dependent helicase YFR038W OS=Saccharomyces cerevisiae GN=YFR038W PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14 Identity = 41/120 (34.17%), Postives = 64/120 (53.33%), Query Frame = 3 Query: 186 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 ++ SGK+ +L +L+ L ++++ S + LDL C + R+DG+ + R+ + FN FLLS++A G G+NL+G + +VLFD DWNP D QA R R G Sbjct: 599 LKTSGKLQILQKLIPPLISE-GHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIG 717
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: YFC1_SCHPO (Uncharacterized ATP-dependent helicase C25A8.01c OS=Schizosaccharomyces pombe GN=SPAC25A8.01c PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14 Identity = 46/124 (37.10%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 174 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 D W++ + K+ L +LL + + DR+VL S +TQ LD+ + + +LR DG+T + RQ L++ F FLLS+KAGG G+NL N ++L+D +NP +D QA R R G Sbjct: 754 DEPWMDAT-KVRKLKKLLTNAVEN-GDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESIN-VFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVG 874 The following BLAST results are available for this feature:
BLAST of CX289077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289077 ID=CX289077; Name=CX289077; organism=Citrus clementina; type=EST; length=545bpback to top |