CX289077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_GIBZE (Putative DNA helicase INO80 OS=Gibberella zeae GN=INO80 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.890e-14 Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 SGK+ L LL L+ R++L T+ +D+ + R Y Y RLDG+T + R+ V+ F + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1625 SGKLAKLDDLLFKLKSE-GHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRDTVHDFQT-RPEIFIFLLSTRAGGLGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLG 1739
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: SWR1_USTMA (Helicase SWR1 OS=Ustilago maydis GN=SWR1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 3 Query: 198 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 GK+ L L+ L++ RI++ + T+ LD+ Y YLRLDG T + RQ L FN ++ AF+LS+++GG G+NL G + ++ +D DWN A + Q R R G Sbjct: 1533 GKLQQLDILMRRLKEG-GHRILIFTQMTRVLDILESFLNYHGYRYLRLDGATKVESRQALTEQFNRDARIS-AFILSTRSGGLGINLTGADTVLFYDLDWNAAIEAQCMDRAHRIG 1646
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_YEAST (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae GN=INO80 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.089e-13 Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 S K+ L LL L+ R+++ T+ +DL + R+Y ++RLDG++ + R+ LV+ + + + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1298 SAKLRKLDELLVKLKSE-GHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQT-NPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1412
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_YEAS7 (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain YJM789) GN=INO80 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.089e-13 Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 S K+ L LL L+ R+++ T+ +DL + R+Y ++RLDG++ + R+ LV+ + + + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1304 SAKLRKLDELLVKLKSE-GHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQT-NPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1418
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: INO80_MAGGR (Putative DNA helicase INO80 OS=Magnaporthe grisea GN=INO80 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.089e-13 Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 195 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 SGK+ L LL L+ R++L T+ +DL + R + Y RLDG+T R+ V+ F + F FLLS++AGG G+NL + ++ +D DWNP D QA R R G Sbjct: 1658 SGKLAKLDELLFKLKAG-GHRVLLYFQMTRMIDLMEEYLTYRNWKYCRLDGSTKFEDRRDTVHDFQT-NPSIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLG 1772
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: ATRX_PONPY (Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.423e-13 Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 165 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL---FAQLCRE-------------------RRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFA-FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 T D +E SGKM +L +L + + D++++ S +LDL F +L R Y RLDG+T+ R+K FND + F++S+KAG G+NL+ NR+++FD WNP+ D Q+ RV+R G Sbjct: 2007 TDADAEVLEHSGKMVLLFEIL-RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG 2155
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: ATRX_PANTR (Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.423e-13 Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 165 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL---FAQLCRE-------------------RRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFA-FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 T D +E SGKM +L +L + + D++++ S +LDL F +L R Y RLDG+T+ R+K FND + F++S+KAG G+NL+ NR+++FD WNP+ D Q+ RV+R G Sbjct: 2007 TDADAEVLEHSGKMVLLFEIL-RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG 2155
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: ATRX_HUMAN (Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=4) HSP 1 Score: 75.8702 bits (185), Expect = 1.423e-13 Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 165 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL---FAQLCRE-------------------RRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFA-FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 T D +E SGKM +L +L + + D++++ S +LDL F +L R Y RLDG+T+ R+K FND + F++S+KAG G+NL+ NR+++FD WNP+ D Q+ RV+R G Sbjct: 2007 TDADAEVLEHSGKMVLLFEIL-RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG 2155
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.427e-13 Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 183 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 W E S +L L + + ++ ++ S +T LDL R R + +LR DG + R+K++ FN+ +K + L+S KAGG GLNL + + L DP WNPA ++QA R+ R G Sbjct: 1105 WKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNE-TKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIG 1224
BLAST of CX289077 vs. ExPASy Swiss-Prot
Match: ATRX_MOUSE (Transcriptional regulator ATRX OS=Mus musculus GN=Atrx PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.427e-13 Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 165 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL---FAQLCRE-------------------RRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFA-FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 545 T D +E SGKM +L +L + + D++++ S +LDL F +L R Y RLDG+T+ R+K FND + F++S+KAG G+NL+ NR+++FD WNP+ D Q+ RV+R G Sbjct: 1990 TDTDAEVLEHSGKMVLLFEIL-RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG 2138 The following BLAST results are available for this feature:
BLAST of CX289077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289077 ID=CX289077; Name=CX289077; organism=Citrus clementina; type=EST; length=545bpback to top |