CX289086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.634e-20 Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 366 RI +AGG + + R+ G L +RAIGD +K N+++P +Q+VT PDI + DD EFLVIA DG+WD + + +V FVR +L E L CEK+ CL + DN T ILV+FK Sbjct: 190 RIQRAGGHVFLQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCEKLVGHCLHSN------DNATAILVKFK 306
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20 Identity = 49/134 (36.57%), Postives = 82/134 (61.19%), Query Frame = 1 Query: 1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSSAEQ 402 RI AGG + + RVNGSL ++RA+GD ++K +Q+V+ P++ I ++DEF+++ACDGIWD +S++EL ++V+ +L L +C V D CL + DNM+++LV F +N P +++ Sbjct: 179 RIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCF----SNAPKVSDE 304
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.868e-20 Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 363 RI AGG + + RVNGSL ++RA+GD ++K +Q+V+ P++ I ++DEF+V+ACDGIWD +S++EL +FV +L L +C V D CL + DNM+++LV F Sbjct: 179 RIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCF 295
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.888e-18 Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 31 VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 366 +G G + ++R+IGD FK NK L EKQ++ +PDI ++ DD EFLVIA G+W C+ S ++V ++ D+L+ E +L VICE+V + LA +N T+ILVQFK Sbjct: 222 LGDFGGGVTISRSIGDFAFKKNKDLDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASG------ENTTVILVQFK 328
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.368e-18 Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 363 RI AGG ++ RV GSL ++RA+GD +K P E Q+V+A P+++ + D+DEF+++A DG+WD LS +L V +L L ++C ++ D CL + DNMT ++V F Sbjct: 203 RIHDAGGTVRRRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGS----LDNMTCMVVCF 319
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.767e-16 Identity = 47/107 (43.93%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 46 GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 366 G ++++R+IGD K N+ LP E Q++T NPDI T+++ DD EFLVIA +G+W +++Q +VD D+L + VICE++ L PS DN T+ILV FK Sbjct: 274 GRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 374
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.767e-16 Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 31 VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSSAEQPPS--DQQSKLASSSAG 447 +G S+ ++R+IGD FK NK L E+Q++ +PDI T ++ D EFLVIA G+W C+ S ++V ++ +L +L VICE++ LA +N T+ILVQFK + P + S +AS+SAG Sbjct: 330 LGYFGESVTISRSIGDFAFKQNKDLNREEQMLICDPDIHTHDITGDMEFLVIASQGLWSCMESADVVAYIHVRLLEGVELRVICEELVQSGLASG------ENTTVILVQFKPGAFQFQYELVDPAAFDTAASNVASTSAG 464
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.140e-16 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 363 RI AGG I+ RV GSL ++RA+GD +K P E Q+V+A P+++ + +DEF+++A DG+WD +S L V +L ++C ++ D CL + DNMT ILV F Sbjct: 210 RIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQLLDTCLCKGS----LDNMTCILVCF 326
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.145e-15 Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 73 GDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 366 GD FK NK L EKQ++ +PDI ++ DD EFLVIA G+W C+ S ++V ++ D+L+ E +L VICE+V + LA +N T+ILVQFK Sbjct: 252 GDFAFKKNKDLDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASG------ENTTVILVQFK 344
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: PP2C4_YEAST (Protein phosphatase 2C homolog 4 OS=Saccharomyces cerevisiae GN=PTC4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.496e-15 Identity = 52/140 (37.14%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 1 RILKAGGFIQVGRVNGSLNLARAIGDVEFK------------------LNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP--SAGGEGCDNMTMILV 357 RI GG + +GRV G L L+RA D +FK L P ++ VT PD+ ++ DEFLV+ACDGIWD ++++L+ F++ L + TKL I K+ D +A S G G DNMT I+V Sbjct: 227 RINDNGGTVSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKLTNITQNLTYGTPPQEAQVTVEPDVLMHKIDYSKDEFLVLACDGIWDIYNNKQLIHFIKYHLVSGTKLDTIITKLLDHGIAQANSNTGVGFDNMTAIIV 366 The following BLAST results are available for this feature:
BLAST of CX289086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289086 ID=CX289086; Name=CX289086; organism=Citrus clementina; type=EST; length=614bpback to top |