CX289086

Overview
NameCX289086
Unique NameCX289086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length614
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15
Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 363
            RI  +GG++  G +NG LN+ARAIGD   +  K+      + +A P++    L ++DEFL+I CDGIWD   SQ  VDF R +L         C+++ D  +   +G    DN++++++ F
Sbjct:  216 RIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKACDGLGPL-SAEPEVMIRNLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPVTCCKELVDEAIKRKSG----DNLSVVVICF 331          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 363
            RI   GG++  G +NG L + RA+GD   +  K +      ++A P++  I L  +DEFL+I  DGIWD  S+Q  VDF R +L     L + C+++ +  +   A     DN+T ++V F
Sbjct:  203 RIESLGGYVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGAS----DNLTAVMVSF 319          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKI 369
            R+   GG++  G +NG L + RA+GD   +  K        ++A P++  I L  DDEFL+I  DGIWD  S+Q +VDF R +L     +   C ++ +  +   A     DN+T +LV F +
Sbjct:  209 RVESLGGYVDDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRLQEHNDVKSCCREIVEEAIKRGA----TDNLTAVLVSFHL 327          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.654e-14
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSSAEQPP 408
            RI + GG+I+ G +NG L++ RA+GD + K+ +     +  + A P+     L +DDEFL+I CDGIWD +SSQ  V  VR  L          E+        +   +  DN+T+I++ F      G  S+EQ P
Sbjct:  226 RITECGGYIEDGYLNGVLSVTRALGDWDMKMPQG---SRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIVRKGLRRHDD----PERCARELAMEAKRLQTFDNLTVIVICFGSELGGGSPSSEQAP 354          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.811e-14
Identity = 52/135 (38.52%), Postives = 75/135 (55.56%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSSAEQP 405
            RI   GG+ + G +NG L + RAIGD E K N    +   +++ +P+I  I L +DDEFL++ACDGIWD LSSQ  V  VR  L           ++       +A  +  DNMT+I++ F    ++ PSS +QP
Sbjct:  235 RIEDLGGYFEDGYLNGVLAVTRAIGDWELK-NPFTDSSSPLIS-DPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKE----AARLQSSDNMTVIVICF----SSVPSSPKQP 359          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.207e-14
Identity = 47/145 (32.41%), Postives = 76/145 (52.41%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSSAEQPPSDQQSKLAS 435
            RI K GG I  G +NG L++ARA+GD   K  K        ++  P++  I L ++DE+L++ CDG+WD +SSQ  V  VR +L          + +    L  ++    CDN+T+++V F   S   P   E P S ++  +++
Sbjct:  214 RIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSLCP---LSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPERCSQALVKEALQRNS----CDNLTVVVVCF---SPEAPPRIEIPKSHKRRSISA 348          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGD--VEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILV 357
            RI  +GG +  G +NG LN+ARA+GD  +E    K   ++   + A P++ T +L ++DEFL+I CDG+WD   SQ  VDF R +L  E    V+C K     +  +   +  DN+T ++V
Sbjct:  238 RIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRL-QEHNDPVMCSK---ELVEEALKRKSADNVTAVVV 354          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C57_ARATH (Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 39/116 (33.62%), Postives = 62/116 (53.45%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQI-------------------VTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKV 291
            R+ +AGG+I  GR+ G + ++RA GD+ FK  K+   +K +                   V A PDI  + L  D EF+++A DG+WD + S ++V +VRDQL     + + CE +
Sbjct:  213 RVKEAGGWIVNGRICGDIAVSRAFGDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQVPLTSDVEFIILASDGLWDYMKSSDVVSYVRDQLRKHGNVQLACESL 328          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 1
Query:   76 DVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 366
            D   K N+ LP E Q++T NPDI T+++ DD EFLVIA +G+W  +++Q +VD   D+L    +  VICE++    L PS      DN T+ILV FK
Sbjct:  428 DFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 518          
BLAST of CX289086 vs. ExPASy Swiss-Prot
Match: P2C05_ORYSJ (Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 1
Query:    1 RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEK-------------------QIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICE 285
            RI  AGG+I  GR+ G ++++RA GD+ FK  K+    K                    ++ ++PD+S +EL  D EF+++A DG+WD + S E V  VRDQL     + V CE
Sbjct:  212 RIRAAGGWIVDGRICGEISVSRAFGDIRFKTRKNEMLVKGVKEGRWTEKFISRINFKGDLIVSSPDVSLVELGPDVEFVLLATDGLWDYIKSSEAVALVRDQLRQHGDVQVACE 325          
The following BLAST results are available for this feature:
BLAST of CX289086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
P2C57_ORYSJ1.953e-1535.54Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C27_ORYSJ2.551e-1534.71Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C54_ORYSJ3.332e-1534.15Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C02_ORYSJ1.654e-1434.56Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
P2C13_ARATH4.811e-1438.52Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
P2C47_ARATH8.207e-1432.41Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C22_ARATH1.400e-1337.19Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C57_ARATH1.828e-1333.62Protein phosphatase 2C 57 OS=Arabidopsis thaliana ... [more]
P2C19_ORYSJ1.828e-1344.33Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]
P2C05_ORYSJ1.828e-1335.96Probable protein phosphatase 2C 5 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC02008H11SK IF1 Citrus clementina cDNA clone C02008H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289086 ID=CX289086; Name=CX289086; organism=Citrus clementina; type=EST; length=614bp
AGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAG
TTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAA
GTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACT
ATTGAACTTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGAT
TTGGGATTGCCTTTCAAGTCAAGAACTTGTCGATTTTGTCAGGGATCAAT
TAACCAACGAAACAAAACTATCAGTCATTTGCGAGAAAGTATTCGATCGG
TGCTTGGCTCCATCAGCTGGTGGTGAAGGATGCGACAACATGACCATGAT
CTTGGTTCAGTTTAAAATTCTTTCTAATAATGGTCCTTCTTCGGCTGAGC
AGCCACCATCTGACCAACAATCCAAGTTAGCCAGCAGTTCAGCAGGGACT
GAATCGAATTAGCTGTAGCACTCTTTGCACTGACTAAATGGTACTCATTT
TCTACTGTCTGAAACACTGCTGAGCTCAGAACCATGGTCCCTGATTTTAC
ATTCGGAAAACGATTCTCATGATTTGGTTGTAAATATTTAAGCTTTTTCA
TTTTAATGGGATAG
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