CX289090
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289090 vs. ExPASy Swiss-Prot
Match: RL18A_HUMAN (60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.633e-29 Identity = 54/93 (58.06%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 142 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTT 420 +Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLT 101
BLAST of CX289090 vs. ExPASy Swiss-Prot
Match: RL18A_BOVIN (60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.633e-29 Identity = 54/93 (58.06%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 142 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTT 420 +Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLT 101
BLAST of CX289090 vs. ExPASy Swiss-Prot
Match: RL18A_DROME (60S ribosomal protein L18a OS=Drosophila melanogaster GN=RpL18A PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.132e-29 Identity = 52/94 (55.32%), Postives = 78/94 (82.98%), Query Frame = 1 Query: 142 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTL 423 +Y+VVGR LP+EK+ +Y+M+++A + + AKS+FWYFLR+LKK KK+ G++++I +++E +P KIKN+GIWLRY SR+G HNMY+EYRD T+ Sbjct: 9 EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTV 102
BLAST of CX289090 vs. ExPASy Swiss-Prot
Match: RL20_SCHPO (60S ribosomal protein L20 OS=Schizosaccharomyces pombe GN=rpl20a PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 2.785e-29 Identity = 56/93 (60.22%), Postives = 75/93 (80.65%), Query Frame = 1 Query: 142 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTT 420 +YQVVGR +PTE + PK++RM+L+A NE AKS++WYFL+ + KVKK+ G+++AINEI E P K K +GIW+RY SR+G HNMYKE+RDTT Sbjct: 5 EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTT 97
BLAST of CX289090 vs. ExPASy Swiss-Prot
Match: RL18A_DANRE (60S ribosomal protein L18a OS=Danio rerio GN=rpl18a PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.079e-28 Identity = 52/93 (55.91%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 142 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTT 420 +Y+VVGR LP+ K+ P +YRM+++A N V AKS+FWYF+ +L+K+KK++G+++ +FEK+P K+KN+GIWLRY SR+G HNMY+EYRD T Sbjct: 9 EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLT 101
BLAST of CX289090 vs. ExPASy Swiss-Prot
Match: RL18A_ICTPU (60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.996e-27 Identity = 51/93 (54.84%), Postives = 74/93 (79.57%), Query Frame = 1 Query: 142 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTT 420 +Y+VVGR LP+ K+ P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ + + E++P K+KN+GIWLRY SR+G HNMY+EYRD T Sbjct: 9 EYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLT 101
BLAST of CX289090 vs. ExPASy Swiss-Prot
Match: RL18A_SALSA (60S ribosomal protein L18a OS=Salmo salar GN=rpl18a PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.690e-26 Identity = 50/93 (53.76%), Postives = 72/93 (77.42%), Query Frame = 1 Query: 142 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTT 420 +Y+VVGR LP+ K+ P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ + + EK P K+KN+G+WLR SR+G HNMY+EYRD T Sbjct: 9 EYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLT 101 The following BLAST results are available for this feature:
BLAST of CX289090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289090 ID=CX289090; Name=CX289090; organism=Citrus clementina; type=EST; length=425bpback to top |