CX289095

Overview
NameCX289095
Unique NameCX289095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length411
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: ERDL1_ARATH (Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.144e-21
Identity = 50/130 (38.46%), Postives = 80/130 (61.54%), Query Frame = 3
Query:    3 KLRGKDADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSATXXXXXXXXXXXSFFLKDH 392
            +LRG++ DI  EAAEI++ +ET  R  ++G+ DLF  +    + IG+GLM+ QQF G + I  Y + IF++AGF S +GT I A++ V  + +    +DR GR+PLL+ S+            S++L++H
Sbjct:  221 RLRGENGDILEEAAEIRETVETSRRESRSGLKDLFNMKNAHPLIIGLGLMLLQQFCGSSAISAYAARIFDTAGFPSDIGTSILAVILVPQSIIVMFAVDRCGRRPLLMSSSIGLCICSFLIGLSYYLQNH 350          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.369e-20
Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = 3
Query:    6 LRGKDADITHEAAEIQDYIETLER---LPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSATXXXXXXXXXXXSFFLKDH 392
            LRG+ +D++ EAAEI +Y E +++   +   G   LFQR+Y  S+TIGV L+   Q GG+NG  FYT +IF S G SS  G I  +++Q+    L T+++D +GR+ LLLVS             SFFLK++
Sbjct:  226 LRGEKSDVSDEAAEILEYTEHVKQQQDIDDRGFFKLFQRKYAFSLTIGVVLIALPQLGGLNGYSFYTDSIFISTGVSSDFGFISTSVVQMFGGILGTVLVDVSGRRTLLLVSQAGMFLGCLTTAISFFLKEN 357          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.788e-20
Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 3
Query:    6 LRGKDADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGF-SSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSATXXXXXXXXXXXSFFLKD 389
            LRG + DIT E  EI+  + +  +      +DL +RRY   + +G+GL+V QQ GGING+ FY+STIFESAG  SS+  T     +QVV T ++T ++D+AGR+ LL +S+            +F+LK+
Sbjct:  243 LRGFETDITVEVNEIKRSVASSTKRNTVRFVDLKRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNAATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKE 371          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.159e-19
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 3
Query:    3 KLRGKDADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSAT 338
            +LRG D DI+ EA  I+D I+  E   +  M +LFQRRY   + IGVGLM  QQ  G +G+ +Y S++F   GF S++GT + A + V    L T+++D+ GR+ LL+ S +
Sbjct:  252 RLRGSDVDISREANTIRDTIDMTENGGETKMSELFQRRYAYPLIIGVGLMFLQQLCGSSGVTYYASSLFNKGGFPSAIGTSVIATIMVPKAMLATVLVDKMGRRTLLMASCS 363          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.976e-19
Identity = 46/132 (34.85%), Postives = 78/132 (59.09%), Query Frame = 3
Query:    3 KLRGKDADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSATXXXXXXXXXXXSFFLKDHEL 398
            +LRG +ADI+ EA++I+   + +E   K+   DLFQR+Y  ++ +G+GLM+ QQF G + +  Y STI   AGFS ++G+ +  +  +    +  I++D+ GR+PLLL S +           +F L+  +L
Sbjct:  229 RLRGGNADISREASDIEVMTKMVENDSKSSFCDLFQRKYRYTLVVGIGLMLIQQFSGSSAVLSYASTILRKAGFSVTIGSTLLGLFMIPKAMIGVILVDKWGRRPLLLTSVSGMCITSMLIGVAFTLQKMQL 360          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.403e-19
Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 3
Query:    6 LRGKDADITHEAAEIQDYIETLER--LPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSATXXXXXXXXXXXSFFLK 386
            LRG  +D++ EAA I +Y + +E+  +   G   LFQR+Y   +TIGV L+   Q GG+NG  FYT TIF S G SS +G I+ +I+Q+    L  +++D +GR+ LLL S             SFFL+
Sbjct:  231 LRGAKSDVSDEAATILEYTKHVEQQDIDSRGFFKLFQRKYALPLTIGVVLISMPQLGGLNGYTFYTDTIFTSTGVSSDIGFILTSIVQMTGGVLGVLLVDISGRRSLLLFSQAGMFLGCLATAISFFLQ 359          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.809e-19
Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 3
Query:    3 KLRGKDADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSATXXXXXXXXXXXSFFLK 386
            KLRG+++DI  EAAEI++ +E   +  ++G+ DLF      S+ IG+GLM+ QQF G   I  Y + IF+ AGF S +GT I A++ +  + +  + +DR GR+PLL++S+            S++L+
Sbjct:  219 KLRGENSDILKEAAEIRETVEISRKESQSGIRDLFHIGNAHSLIIGLGLMLLQQFCGSAAISAYAARIFDKAGFPSDIGTTILAVILIPQSIVVMLTVDRWGRRPLLMISSIGMCICSFFIGLSYYLQ 346          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: EDL12_ARATH (Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.809e-19
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 3
Query:    3 KLRGKDADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLVSATXXXXXXXXXXXSFFLKD 389
            KLRG+  DI  EA EI+  +E  ++     +  LF++RY   +TIG+GLM+ QQ  G  GI  Y ST+F+ AGF + +G ++ +++ V  + +  I++DR GR+PLL+ SA            +F +KD
Sbjct:  220 KLRGRKYDIVPEACEIKISVEASKKNSNINIRSLFEKRYAHQLTIGIGLMLLQQLCGTAGISSYGSTLFKLAGFPARIGMMVLSLIVVPKSLMGLILVDRWGRRPLLMTSALGLCLSCITLAVAFGVKD 348          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: ERDL9_ARATH (Sugar transporter ERD6-like 9 OS=Arabidopsis thaliana GN=At3g05155 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.029e-17
Identity = 44/109 (40.37%), Postives = 68/109 (62.39%), Query Frame = 3
Query:    3 KLRGKDADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQVVVTGLNTIVIDRAGRKPLLLV 329
            KLRG +ADI  E  EI   + ++E      M  LF+++Y   +TIG+GLM+ QQ  G  G+ +YT ++F+ AGF S +G  + +I+ V    L  I+++R GR+PLL+V
Sbjct:  221 KLRGDEADIVKETQEI---LISVEASANISMRSLFKKKYTHQLTIGIGLMLLQQLSGSAGLGYYTGSVFDLAGFPSRIGMTVLSIVVVPKAILGLILVERWGRRPLLMV 326          
BLAST of CX289095 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.809e-12
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 3
Query:   81 PKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSV-GTIIYAILQVVVTGLNTIVIDRAGRKPLLLVS 332
            P+AG  DLF  RY + V++G  L +FQQ  GIN + +Y++++F SAG  S V  + +     V  T + + ++D+ GRK LLL S
Sbjct:  330 PEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSAGIQSDVAASALVGASNVFGTAVASSLMDKMGRKSLLLTS 414          
The following BLAST results are available for this feature:
BLAST of CX289095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
ERDL1_ARATH6.144e-2138.46Sugar transporter ERD6-like 1 OS=Arabidopsis thali... [more]
EDL15_ARATH1.369e-2041.67Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
ERDL6_ARATH1.788e-2041.09Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
ERD6_ARATH1.159e-1941.96Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
EDL18_ARATH1.976e-1934.85Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
EDL14_ARATH4.403e-1940.31Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
ERDL2_ARATH9.809e-1937.50Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]
EDL12_ARATH9.809e-1937.21Sugar transporter ERD6-like 12 OS=Arabidopsis thal... [more]
ERDL9_ARATH7.029e-1740.37Sugar transporter ERD6-like 9 OS=Arabidopsis thali... [more]
PLST4_ARATH6.809e-1240.00Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC02009A11SK IF1 Citrus clementina cDNA clone C02009A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289095 ID=CX289095; Name=CX289095; organism=Citrus clementina; type=EST; length=411bp
AGAAACTTCGTGGCAAGGATGCTGATATAACACATGAGGCAGCTGAAATC
CAGGATTACATAGAAACTCTAGAAAGGCTTCCAAAAGCTGGAATGCTGGA
TTTGTTTCAAAGAAGATACTTGCGCTCAGTCACGATTGGAGTCGGATTGA
TGGTGTTTCAACAATTTGGTGGAATCAATGGAATCTGTTTTTACACCAGC
ACTATTTTTGAGTCAGCAGGATTTTCTTCCAGCGTTGGAACAATAATCTA
TGCCATACTTCAGGTTGTTGTTACAGGCCTGAATACAATTGTGATCGACA
GAGCTGGAAGAAAGCCCTTATTATTGGTTTCTGCAACAGGACTAGTCTTG
GGTTGTTTACTCGTAGGGGTTTCATTCTTTCTGAAGGATCATGAATTGGG
ACTCGAGTCAG
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