CX289101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB12_CANFA (Ras-related protein Rab-12 (Fragment) OS=Canis familiaris GN=RAB12 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.378e-11 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 209 IKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 +++++IG GVGK+ L+ R KI+T+EL GK+I+LQIWDTAGQERF +IT+AY Sbjct: 7 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAY 75
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.378e-11 Identity = 35/70 (50.00%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KL+LIGDSGVGKS LL R +T +++GK +K QIWDTAGQER+R IT+AY Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAY 82
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.718e-11 Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L+K ++IG VGKSCLL R R +++ GK +KLQIWDTAGQERFR++ +Y Sbjct: 7 LVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISY 76
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.468e-11 Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KL+LIGDSGVGKS LL R +++ +D K IK QIWDTAGQER+R IT+AY Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAY 82
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.468e-11 Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L K+++IGDS VGKS LL R + +++E++GK +K QIWDTAGQERFR +T+AY Sbjct: 12 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAY 81
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 65.4698 bits (158), Expect = 9.753e-11 Identity = 31/69 (44.93%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 212 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 K++L+GDSGVGK+CLL+R + + +++DG ++KLQ+WDTAGQERFR++T AY Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAY 133 The following BLAST results are available for this feature:
BLAST of CX289101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289101 ID=CX289101; Name=CX289101; organism=Citrus clementina; type=EST; length=417bpback to top |