CX289103

Overview
NameCX289103
Unique NameCX289103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length340
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.357e-11
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 2 
Query:    8 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 136
            R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct:  682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
The following BLAST results are available for this feature:
BLAST of CX289103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PRR37_ORYSI4.357e-1176.74Two-component response regulator-like PRR37 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC02009B08SK IF1 Citrus clementina cDNA clone C02009B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289103 ID=CX289103; Name=CX289103; organism=Citrus clementina; type=EST; length=340bp
CAGCCAAAGGGATGCAGCTTTGACAAAATTCCGGCTCAAGCGGAAAGATA
GATGCTATGACAAAAAGGTTCGATACCAAAGCCGGAAAAGTTTAGCAGAG
CAACGACCCCGGGTCAAAGGACAGTTTGTTCGTCAAGTGAAAAATGAAAC
CAAAGATGCTAACGCCGATGGTTGTCCTTAATCTTGAGTAATGCACTTAT
GTGTAATTTAATTTCTCCTTCGTGGAATATAGGTCTCTAGTATGTTGTTA
TTTTCAGAAAGCAGAGGTGGATCATTTGACAGCTTCGAATATTGCAGGTT
CTTTTGGAGTTGATGCGACCATCTCTCAACTTTTCCCATT
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