CX289104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB8 (Triosephosphate isomerase OS=Shewanella baltica (strain OS185) GN=tpiA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.760e-21 Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 2 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 259 DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 168 DNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB5 (Triosephosphate isomerase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tpiA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.760e-21 Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 2 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 259 DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 168 DNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.604e-21 Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 2 Query: 8 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 241 ++LAYEPVWAIGTGK A+P QAQE+HA +R + D E+A +T I+YGGS +N KEL + PDVDG L+GGA+LK Sbjct: 162 IILAYEPVWAIGTGKTASPEQAQEIHAFIRSIVADKYGKEIADNTSILYGGSCKPSNAKELFSNPDVDGGLIGGAALK 239
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.707e-21 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 2 Query: 8 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDII 262 +V+AYEPVWAIGTGK ATPA AQEVHA LRK L+ +AE A RI+YGGS+ N KEL A D+DG L+GGA+LK +F+ I+ Sbjct: 161 IVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAK-NAEAAMQVRILYGGSMKPENAKELLAMSDIDGGLIGGAALKAADFLAIV 245
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_SHESH (Triosephosphate isomerase OS=Shewanella sediminis (strain HAW-EB3) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.148e-21 Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 2 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 259 DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GG SL EF+ + Sbjct: 168 DNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNSTEFLSL 253
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_SHEAM (Triosephosphate isomerase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.148e-21 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 2 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 259 DN ++AYEP+WA+GTGK ATP QAQEVHA +R+ L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 168 DNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRRRLSE-VSPFIGENVRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLTL 253
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_LACH4 (Triosephosphate isomerase OS=Lactobacillus helveticus (strain DPC 4571) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.148e-21 Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 5 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 247 N+V+AYEP+WAIGTGK A+ QA+E+ +R+ +KD + E A + RI YGGSV AN KEL ++PD+DG LVGGASLKPE Sbjct: 162 NLVIAYEPIWAIGTGKTASSDQAEEMCKTIRETVKDLYNEETAENVRIQYGGSVKPANVKELMSKPDIDGGLVGGASLKPE 242
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_ERWT9 (Triosephosphate isomerase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.148e-21 Identity = 56/91 (61.54%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 8 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 268 VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A VAA I YGGSVN N EL AQPD+DG LVGGASLK + F I+K+ Sbjct: 162 VVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKKDATVAAQVIIQYGGSVNDKNAAELFAQPDIDGALVGGASLKADAFAAIVKA 248
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.148e-21 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 2 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 262 + VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A+VA I YGGSVN AN EL QPD+DG LVGGASLK + +I Sbjct: 160 EGVVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKVAEQVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKADAFAVI 245
BLAST of CX289104 vs. ExPASy Swiss-Prot
Match: TPIS_SHEWM (Triosephosphate isomerase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tpiA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.029e-21 Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 2 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 259 DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GG SL EF+ + Sbjct: 168 DNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNSTEFLSL 253 The following BLAST results are available for this feature:
BLAST of CX289104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289104 ID=CX289104; Name=CX289104; organism=Citrus clementina; type=EST; length=269bpback to top |