CX289112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.970e-34 Identity = 87/180 (48.33%), Postives = 101/180 (56.11%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAP----------------TPTSFAQSFDELFFSFT------SLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVE--------PSHNVPLAEQEKVILQFGKIGKDIFTMDYHY 451 YELNVL TRGPRRM C+M +IP SS+E GG P + TSF+QSF SF+ S+ +PL L+NK PRWHEQLQCWCLNFRGRVT+ASVKNFQLVAA PS P A+ EKVILQFGK+ +D+FTMDY Y Sbjct: 249 YELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTTSFSQSFRSTT-SFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGP-ADPEKVILQFGKVARDMFTMDYRY 426
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.970e-34 Identity = 86/186 (46.24%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFA---QSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXX-----------------QPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPS-------HNVPLAE---------QEKVILQFGKIGKDIFTMDYHY 451 YELNVL TRGPRRM+C M++IP SS+ EGG P DE F S TS ++ ITY PL LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL+AA +P PL + +K+ILQFGK+GKD+FTMD+ Y Sbjct: 249 YELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITSSSSRK-ITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRY 433
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 8.621e-33 Identity = 78/152 (51.32%), Postives = 94/152 (61.84%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGG--AAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHY 451 YELNVL +RGPRRM CIMDTIP S +E G A+ + +SF+ +F S + +P+ PL L NKAPRWHEQL+CWCLNF GRVTVASVKNFQLVA + E++ILQFGK+GKD+FTMDY Y Sbjct: 218 YELNVLGSRGPRRMRCIMDTIPMSIVESRGVVASTSISSFSSRSSPVFRSHS-----KPLR---SNSASCSDSGNNLGDPPLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQLVAVSDCEAG---QTSERIILQFGKVGKDMFTMDYGY 358
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 8.621e-33 Identity = 77/154 (50.00%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHN----VPLAEQEKVILQFGKIGKDIFTMDYHY 451 YELNVL +RGPR+M C+MDTIP S++E G A P+ F S S +P+ PL L NK PRWHEQL+CWCLNF GRVTVASVKNFQLVAA + P + E++ILQFGK+GKD+FTMDY Y Sbjct: 227 YELNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTR---STLSRSQSKPLR----------SSSSHLKETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAAGASCGSGTGMSPERQSERIILQFGKVGKDMFTMDYGY 367
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.921e-32 Identity = 85/195 (43.59%), Postives = 99/195 (50.77%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAP------TPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQ------------PLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAV---------EPSHNVPLAEQ------------------EKVILQFGKIGKDIFTMDYHY 451 YELNVL TRGPRRM C M +IP S++E GG P P F +SF + SF+ + T + PL L+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQL+AA EPS A+Q + VILQFGK+ KD+FTMDY Y Sbjct: 246 YELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRY 440
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.278e-32 Identity = 83/185 (44.86%), Postives = 98/185 (52.97%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAP-----------------TPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQE------------------KVILQFGKIGKDIFTMDYHY 451 YELNVL TRGPRRM C M +IP S+++ G P T TS SF + F+S + E +PL L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQL+AA S + L +Q+ KVILQFGK+GKD+FTMDY Y Sbjct: 249 YELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTSSRFSFMDRSLDFSSSRFSE---ISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAS-SESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRY 429
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.626e-31 Identity = 79/169 (46.75%), Postives = 95/169 (56.21%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQ-SFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVA---------------AVEPSHNVPLAEQ---EKVILQFGKIGKDIFTMDYHY 451 YELN+L TRGPRRMNCIM +IP ++E GG P+ F Q S DE F S S K +PL LK K PRW + L+CWCLNF+GRVTVASVKNFQL++ A PS + EQ +K+IL FGK+GKD+FTMDY Y Sbjct: 245 YELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSK------IVNHSGDFTRPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRY 407
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP7_ARATH (Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.879e-25 Identity = 65/148 (43.92%), Postives = 81/148 (54.73%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDY 445 Y+ N+L++RGPRRM S++ +P+ +S S D+ T + K LKNKAPRWHE LQCWCLNF GRVTVASVKNFQLVA V+ S ++E V+LQFGK+G D FTMDY Sbjct: 232 YKFNLLKSRGPRRM--------VSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKP----------------NKDGSSLTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDDTFTMDY 355
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP10_ORYSJ (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica GN=TULP10 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.879e-25 Identity = 65/148 (43.92%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDY 445 Y+ N+L++RGPRRM C M+ E SLK K L+NKAPRWHE LQCWCLNF GRVTVASVKNFQLVA +PSH + ++E VILQFGK+ +IFTMDY Sbjct: 219 YKYNLLKSRGPRRMFCTMECPSTQETWEN---------------------SLKTKS-----------------LRCTGTTVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVGDEETVILQFGKVDSNIFTMDY 328
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP9_ORYSJ (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.474e-24 Identity = 67/148 (45.27%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDY 445 Y+ N L++RGPRRM C + P S A + S +S PLAL+NKAPRWHE LQCWCLNF GRVTVASVKNFQLVA S +A++E VILQFGKI D FTMDY Sbjct: 240 YKFNFLKSRGPRRMQCNIQ------------CPVGQSTASDPLKKLISTSS---------------------------PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDY 348 The following BLAST results are available for this feature:
BLAST of CX289112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289112 ID=CX289112; Name=CX289112; organism=Citrus clementina; type=EST; length=453bpback to top |