CX289138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.677e-20 Identity = 51/161 (31.68%), Postives = 73/161 (45.34%), Query Frame = 2 Query: 8 GPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAF 490 G +F F +N + ++AA+PFG PL +G G A + P RT + PR+IP +Y +P + M G LPF I+I+L++I S+W H++Y L YF L AED+ W WRSFL G T + Sbjct: 443 GIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNA-IEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVY 602
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.677e-20 Identity = 51/161 (31.68%), Postives = 73/161 (45.34%), Query Frame = 2 Query: 8 GPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAF 490 G +F F +N + ++AA+PFG PL +G G A + P RT + PR+IP +Y +P + M G LPF I+I+L++I S+W H++Y L YF L AED+ W WRSFL G T + Sbjct: 442 GIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNA-IEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVY 601
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.677e-20 Identity = 51/161 (31.68%), Postives = 73/161 (45.34%), Query Frame = 2 Query: 8 GPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAF 490 G +F F +N + ++AA+PFG PL +G G A + P RT + PR+IP +Y +P + M G LPF I+I+L++I S+W H++Y L YF L AED+ W WRSFL G T + Sbjct: 443 GIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNA-IEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVY 602
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = 2 Query: 29 CF-LNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 CF LN +++ A+PF PL+ LG G K + P RT + PR+IP WY + + MAG LPF A++IEL++IF+++W ++ Y + YFQL AED+ WWWR+FL G + ++ Sbjct: 429 CFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYV 583
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = 2 Query: 29 CF-LNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 CF LN +++ A+PF PL+ LG G K + P RT + PR+IP WY + + MAG LPF A++IEL++IF+++W ++ Y + YFQL AED+ WWWR+FL G + ++ Sbjct: 428 CFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYV 582
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = 2 Query: 29 CF-LNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 CF LN +++ A+PF PL+ LG G K + P RT + PR+IP WY + + MAG LPF A++IEL++IF+++W ++ Y + YFQL AED+ WWWR+FL G + ++ Sbjct: 429 CFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYV 583
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = 2 Query: 29 CF-LNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 CF LN +++ A+PF PL+ LG G K + P RT + PR+IP WY + + MAG LPF A++IEL++IF+++W ++ Y + YFQL AED+ WWWR+FL G + ++ Sbjct: 428 CFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYV 582
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = 2 Query: 29 CF-LNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 CF LN +++ A+PF PL+ LG G K + P RT + PR+IP WY + + MAG LPF A++IEL++IF+++W ++ Y + YFQL AED+ WWWR+FL G + ++ Sbjct: 428 CFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYV 582
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: YON8_SCHPO (Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe GN=SPBC1105.08 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.345e-16 Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 2 Query: 32 FLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 F N V + ++++ +PF PL +G + G S+ EF P RT + PR+IP + S+ P + G +PF I IEL+ I S+W H +Y YFQL +E++ WWWRSF+ G G ++ Sbjct: 417 FFNMVFWSKSSSSTVPFSSWLLLIFLYLLFTVPLSFVGSLIGFRSR-EFVPPVRTNQIPRQIPSHSIWLSSFPSAIIGGSIPFLVILIELFSILDSLWFHPLYFMFGFSFFCFGILVTTCIMVSIITVYFQLCSENYNWWWRSFITPGFCGIYV 569
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TMN1_YEAST (Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae GN=EMP70 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 40/157 (25.48%), Postives = 66/157 (42.04%), Query Frame = 2 Query: 8 GPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGS 478 G + L LN + +++ +P PL G + + + P +T + R+IP PWY IP +AG PF +I +ELY+I+ S+W ++I+ +TY L E+ +W WR F+ GG+ Sbjct: 447 GAILLIIIALNFFLMFVHSSGVIPASTLFFMVFLWFLFSIPLSFAGSLIARKRCHWDEHPTKTNQIARQIPFQPWYLKTIPATLIAGIFPFGSIAVELYFIYTSLWFNKIFYMFGFLFFSFLLLTLTSSLVTILITYHSLCLENWKWQWRGFIIGGA 603 The following BLAST results are available for this feature:
BLAST of CX289138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289138 ID=CX289138; Name=CX289138; organism=Citrus clementina; type=EST; length=545bpback to top |