CX289160

Overview
NameCX289160
Unique NameCX289160
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.309e-29
Identity = 63/174 (36.21%), Postives = 102/174 (58.62%), Query Frame = 1
Query:    4 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQ-ESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLL 522
            RY +  G+   + YLH  S   +IHRD+K+ NILL  D  P++ DFG+A+      +  T   V GT GY+ PEY   G+ + K DVY+FGV++LE++ G+K  S +   G   +LV +   + ++  + +L+D  +G NYD +++ R +   +LC++ +P  RP MS V  +L
Sbjct:  411 RYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLVTYVWRLWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLCVQENPADRPTMSTVFHML 584          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29
Identity = 73/174 (41.95%), Postives = 104/174 (59.77%), Query Frame = 1
Query:    4 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNN-YDYDQMERMVLASILCIRRDPRARPQMSLVLKLL 522
            R K+A G A+ L YLH   + R+IHRDVKSSNILL  D E +L+DFG+AK    S SH T T V GT GY+ PEY    ++ +K DVY++G+VLLELLT RK +  D       L+M       + +V ++ DP + +   D   ++++   ++LC +R P  RP M  V ++L
Sbjct:  747 RLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSH-TSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAV--DDESNLHHLIM---SKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVL 914          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29
Identity = 63/174 (36.21%), Postives = 103/174 (59.20%), Query Frame = 1
Query:    1 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLL 522
            +RY +  G+A  + YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      +    + + GT+GY++PEY M G+ + K DVY+FGV++LE+++GRK  S       + LV  A  +  +G    L+DP + ++    ++ R     +LC++ DP  RP MS +  +L
Sbjct:  434 QRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVML 607          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.144e-29
Identity = 71/187 (37.97%), Postives = 105/187 (56.15%), Query Frame = 1
Query:    1 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASIL-----CIRRDPRARPQMSLVLKLLRGDADVTK 546
            +R  +A+ VA  +EYLH  + Q  IHRD+K SNILL DD   +++DFGL + A      I  T +AGTFGYLAPEY + G+V  K+DVY+FGV+L+EL+TGRK +    P+    LV W K +  + + +     A+    D D+     + ++      C  R+P  RP M   + +L    ++ K
Sbjct:  690 QRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYINKEAS--FKKAIDTTIDLDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLVELWK 873          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.144e-29
Identity = 68/176 (38.64%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    4 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGN--NYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLR 525
            RY++ +G A+ L YLH      ++HRD+K++NIL+  DFEP ++DFGLAK             VAG++GY+APEY    K+ +K DVY++GVV+LE+LTG++PI    P+G   LV W +    S    ++LD  L +    + D+M +++  ++LC+   P  RP M  V  +L+
Sbjct:  893 RYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIH-LVDWVRQNRGS---LEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK 1064          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29
Identity = 68/176 (38.64%), Postives = 115/176 (65.34%), Query Frame = 1
Query:    7 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGK-VTQLLDPALGNNYDY--DQMERMVLASILCIRRDPRARPQMSLVLKLLR 525
            Y++A+GVA+ + YLH      ++HRD+K SNILL  DFE +++DFG+AK   T  S    + VAG++GY+APEY    +V+ K D+Y++GV+LLE++TG++ +  +  +G  S+V W +  L + + V ++LD ++G +     ++M++M+  ++LC  R P  RP M  VL +L+
Sbjct:  827 YQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES---MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEG-NSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQ 998          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29
Identity = 68/175 (38.86%), Postives = 103/175 (58.86%), Query Frame = 1
Query:    4 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPAL--GNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLL 522
            RYK+ +G A+ L YLH      ++HRD+K++NIL+  DFEP + DFGLAK         +   +AG++GY+APEY    K+ +K DVY++GVV+LE+LTG++PI    P G   +V W K I    +  Q++D  L      + ++M + +  ++LCI   P  RP M  V  +L
Sbjct:  894 RYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLH-IVDWVKKI----RDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAML 1063          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.774e-29
Identity = 66/180 (36.67%), Postives = 105/180 (58.33%), Query Frame = 1
Query:    7 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYF--MYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVM-WAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLRGDAD 537
            Y +A+G+A  LEYLH G   R++H D+K  NILL D+F P+++DFGLAK      S ++  D  GT GY+APE    MYG ++ K DVY++G+++L+++  R  +      G  +    W    L +G  T ++   + N  D   +++M+L S+ CIR  P  RP M+ V++++ G  D
Sbjct:  594 YGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGARNKVETTTCNGSTAYFPDWIYKDLENGDQTWIIGDEI-NEEDNKIVKKMILVSLWCIRPCPSDRPPMNKVVEMIEGSLD 772          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.774e-29
Identity = 64/174 (36.78%), Postives = 101/174 (58.05%), Query Frame = 1
Query:    4 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLR 525
            R K+ +  A+ LEYLH+G    ++HRDVK++NILL + F+ +L+DFGL++           T VAGT GYL PEY+   ++N+K DVY+FG+VLLE++T R  I     K    +  W   +L+ G +  ++DP L  +Y+   + + +  ++ C+      RP MS V   L+
Sbjct:  672 RLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREK--PHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELK 843          
BLAST of CX289160 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.774e-29
Identity = 63/171 (36.84%), Postives = 104/171 (60.82%), Query Frame = 1
Query:    4 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI-TCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVL 513
            R ++A+  A  LEYLH+G    ++HRDVKS+NILL ++F+ +++DFGL++            T VAGT GYL PEY++  ++++K DVY+FG++LLE++T ++ I  D  +   ++  W   ++  G  +Q++DP L  NYD   + R +  ++ C       RP MS V+
Sbjct:  665 RLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVI--DQTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVI 833          
The following BLAST results are available for this feature:
BLAST of CX289160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
CRK24_ARATH2.309e-2936.21Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
ERECT_ARATH3.938e-2941.95LRR receptor-like serine/threonine-protein kinase ... [more]
CRK7_ARATH3.938e-2936.21Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
TMK1_ARATH5.144e-2937.97Probable receptor protein kinase TMK1 OS=Arabidops... [more]
RCH2_ARATH5.144e-2938.64Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y5148_ARATH6.718e-2938.64Probable leucine-rich repeat receptor-like protein... [more]
RCH1_ARATH6.718e-2938.86LRR receptor-like serine/threonine-protein kinase ... [more]
Y5392_ARATH8.774e-2936.67Probable receptor-like protein kinase At5g39020 OS... [more]
Y2289_ARATH8.774e-2936.78Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH8.774e-2936.84Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC02009H03SK IF1 Citrus clementina cDNA clone C02009H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289160 ID=CX289160; Name=CX289160; organism=Citrus clementina; type=EST; length=600bp
GAGAGATATAAGGTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCA
CAGTGGCAGTGCTCAACGTGTGATCCACAGGGATGTTAAATCATCAAATA
TATTACTGTCAGATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCC
AAGTGGGCATCAACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGG
AACCTTTGGCTACCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATG
ACAAGATTGATGTCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACT
GGAAGGAAGCCTATAAGCAACGATCATCCAAAAGGCCAAGAGAGCCTAGT
CATGTGGGCAAAGCCAATTCTGAGCAGTGGGAAGGTTACCCAGTTGTTAG
ATCCAGCCTTGGGCAACAACTATGACTATGACCAGATGGAGAGAATGGTT
TTAGCATCTATTCTCTGTATCAGGCGTGACCCTCGAGCTAGGCCTCAAAT
GAGCCTTGTTTTGAAGCTCCTCCGAGGTGATGCTGATGTGACCAAATGGG
CAAGGTTACAAGTTAATGCTTCAGAAGAATCTGAAATGCTGGATGATGAA
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