CX289162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHOS1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=clpX PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 79/168 (47.02%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I++R + S IGFGA V+ DA L + ++ DL+ +GLIPEF+GR P++ +L+ L+E LV +LTEPKNAL +QY+++F + VKL FT DAL IAK+A+ + TGARGLR+++E+IL + MFE+P G V V+V++EAV S P Sbjct: 249 FAGLEKIIAQRGKGSGIGFGAEVKD-------PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFELP----GLEGVEEVVVNEEAVNSGAKP 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_AGRT5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpX PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K IS R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L F +DALR IA++A+ + TGARGLR+++E IL + MFE+P + V V++ + V V P Sbjct: 253 FAGLDKIISARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARRAITRKTGARGLRSIMEKILLDTMFELPTLE----GVREVVISNDVVSGVARP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHIME (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium meliloti GN=clpX PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 9.738e-35 Identity = 79/170 (46.47%), Postives = 113/170 (66.47%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K IS R + +SIGFGA VRA + R G +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARGLR+++E IL + MFE+P + V V++ E V P Sbjct: 253 FAGLDKIISARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTLE----GVREVVISDEVVKGTARP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHILW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=clpX PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.272e-34 Identity = 77/162 (47.53%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GL+K IS R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR+++E IL + MFE+P + V V++ +E V Sbjct: 253 FAGLDKIISARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE----GVREVVISEEVV 403
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHIL3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=clpX PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.272e-34 Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GL+K IS R + +SIGFGA V++ D +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L+F +DALR IA+KA+ + TGARGLR+++E IL + MFE+P + V V++ +E V Sbjct: 253 FAGLDKIISARGEKTSIGFGASVKSQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELNFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE----GVREVVISEEVV 403
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHIEC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.272e-34 Identity = 77/162 (47.53%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GL+K IS R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR+++E IL + MFE+P + V V++ +E V Sbjct: 253 FAGLDKIISARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE----GVREVVISEEVV 403
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHIE6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CIAT 652) GN=clpX PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.272e-34 Identity = 77/162 (47.53%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GL+K IS R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR+++E IL + MFE+P + V V++ +E V Sbjct: 253 FAGLDKIISARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE----GVREVVISEEVV 403
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_PARDP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Paracoccus denitrificans (strain Pd 1222) GN=clpX PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.272e-34 Identity = 75/182 (41.21%), Postives = 121/182 (66.48%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 547 F GL++ I++R + +++GFGA V+ + G L + ++ DL+ +GLIPEF+GR P++ +L L+E L+ +LT+PKNAL +QY+++F + +VKL FT+DAL IAK+A+ + TGARGLR+++E+IL + MF++P G SV V+V++EA VD P ++H D + E Sbjct: 249 FAGLDRIIAQRNKGTAMGFGAAVKEDDDKG-------VGELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNALVKQYQRLFDLESVKLTFTEDALTAIAKRAIKRKTGARGLRSIMEDILLDTMFDLP----GMDSVEEVVVNEEA---VDNPTAKPLLIHTDSKKE 416
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ZYMMO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Zymomonas mobilis GN=clpX PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.661e-34 Identity = 75/168 (44.64%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL++ I++R + SIGFGA V A D T +L+ + DL+ +GLIPEF+GR P+L +L L++ LV++LTEPKNAL +QY+K+F + + KL FT+DAL IAKK + + TGARGLR++LE IL + MFE+P + V+ ++VDK+ P Sbjct: 250 FAGLDRIIADRLEGKSIGFGAHVAA-------PDERRTGEILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFELEDAKLEFTEDALAAIAKKGIERKTGARGLRSILEGILLDTMFELPSLE----GVSEIIVDKDVAEGKKEP 406
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_THISH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=clpX PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.661e-34 Identity = 72/162 (44.44%), Postives = 105/162 (64.81%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GL+K I +R + IGF A V++ G + S L V+ DL+ YGLIPEF+GR P++ +L L+ED L+Q+LTEPKNAL +QY K+F M V + F +DALR +A KAM + TGARGLR +LE +L + M+++P T+ +V+ V++D + Sbjct: 252 FAGLDKVIRDRTEKGGIGFSAKVKSKEEKGPV------SRTLSGVEPEDLIKYGLIPEFVGRLPVVATLEELDEDALIQILTEPKNALTKQYGKLFEMEGVDIEFREDALRAVAAKAMERKTGARGLRTILEQVLLDTMYDLPSTE----NVSKVVIDDAVI 403 The following BLAST results are available for this feature:
BLAST of CX289162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289162 ID=CX289162; Name=CX289162; organism=Citrus clementina; type=EST; length=579bpback to top |