CX289162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHESA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella sp. (strain ANA-3) GN=clpX PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.169e-34 Identity = 80/169 (47.34%), Postives = 107/169 (63.31%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G D S L V+ DLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L+EPKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E IL + M++IP + V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKDKATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSIE----GVVKAVVDESVVNGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SPHWW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GLEK I +R Q SIGFGA V A + T L+ + DL+ +GLIPEF+GR P++ +L L+E LV++LT PKNAL +QY+K+F M VKL FTDDAL IA+KA+ + TGARGLR++LE +L + MF++P V+ ++VDK+ V Sbjct: 251 FAGLEKIIGDRLQGKSIGFGAYVAA-------PEERRTGETLQQCEPEDLLKFGLIPEFVGRLPVIATLMDLDEAALVEILTAPKNALVKQYQKLFDMEGVKLGFTDDALVAIARKAITRKTGARGLRSILEGLLLDTMFDLP----SMDGVDEIMVDKDVV 401
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB9 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS195) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 79/169 (46.75%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G + S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L++PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E+IL + M++IP V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKEKATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIP----SVDGVVKAVVDESVVKGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS185) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 79/169 (46.75%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G + S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L++PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E+IL + M++IP V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKEKATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIP----SVDGVVKAVVDESVVKGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 79/169 (46.75%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G + S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L++PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E+IL + M++IP V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKEKATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIP----SVDGVVKAVVDESVVKGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS223) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 79/169 (46.75%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G + S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L++PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E+IL + M++IP V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKEKATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIP----SVDGVVKAVVDESVVKGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHOS5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 78/168 (46.43%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I++R + S IGFGA V+ D+ L ++ DL+ +GLIPEF+GR P++ +L+ L+E LV +LTEPKNAL +QY+++F + VKL FT DAL IAK+A+ + TGARGLR+++E+IL + MFE+P G V V+V++EAV S P Sbjct: 249 FAGLEKIIAQRGKGSGIGFGAEVKD-------PDSRGVGELFTELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFELP----GLEGVEEVVVNEEAVNSGAKP 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_METSB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 75/168 (44.64%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK IS R + +SIGFGA V+A D T + V+ DL+ +GLIPEF+GR P++ +L L+E+ L ++LTEPKNAL +QY+++F M N +L F D+AL ++AKKA+ + TGARGLR+++E IL + MF++P G SV V++ + V P Sbjct: 250 FAGLEKIISTRGKGTSIGFGATVQA-------PDDRRTGEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEMENTELSFQDEALNVVAKKAIERRTGARGLRSIMEGILLDTMFDLP----GLDSVEQVVIGPDVVEGKSRP 406
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_HALHL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 73/168 (43.45%), Postives = 107/168 (63.69%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I ER + IGF A ++ G + L++V+ DLV YGLIPEF+GR P++ +L+ L+++ LVQ+L EPKNAL +QY+K+F M V+L DDALR +A KAM + TGARGLR ++E +L E M+E+P + +V+ V+VD+ + P Sbjct: 253 FAGLDKVIQERSERGGIGFSAEIK------GEGERASVGETLQTVEPSDLVRYGLIPEFVGRLPVIATLNELDQEALVQILREPKNALVKQYQKLFEMEGVELDLRDDALRAVADKAMERKTGARGLRTIIEQVLLETMYELPSME----NVSKVVVDESVIAGDSDP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_AGRVS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=clpX PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 79/170 (46.47%), Postives = 112/170 (65.88%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K IS R + +SIGFGA V + + R G +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR+++E IL + MFE+PE + V V++ E V P Sbjct: 253 FAGLDKIISARGEKTSIGFGATVVSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELSFHEDALREIARKAITRKTGARGLRSIMEKILLDTMFELPELE----GVREVVISDEVVRGAARP 409 The following BLAST results are available for this feature:
BLAST of CX289162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289162 ID=CX289162; Name=CX289162; organism=Citrus clementina; type=EST; length=579bpback to top |