CX289166

Overview
NameCX289166
Unique NameCX289166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT_PINTA (Caffeoyl-CoA O-methyltransferase OS=Pinus taeda GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.801e-68
Identity = 124/145 (85.52%), Postives = 137/145 (94.48%), Query Frame = 3
Query:   84 HKEVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            H+EVGHKSLLQSDALYQYILETSVYPRE E MKEL  +TAKHPWN+MTTSADEGQFL +LLKL+NAKNTMEIGVYTGYSLL+TALALPDDGKILAMDINRENY++GLP+I+KAGVAHKIDFREGPALPVLD L+++E  HGSFDF
Sbjct:   27 HQEVGHKSLLQSDALYQYILETSVYPREPEPMKELPRVTAKHPWNLMTTSADEGQFLGLLLKLINAKNTMEIGVYTGYSLLSTALALPDDGKILAMDINRENYDIGLPIIEKAGVAHKIDFREGPALPVLDELLKNEDMHGSFDF 171          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 5.240e-68
Identity = 125/157 (79.62%), Postives = 137/157 (87.26%), Query Frame = 3
Query:   48 SNAEDQQNQQGGHKEVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            +N      Q+  H EVGHKSLL+SD LYQYIL+TSVYPRE ESMKELRE+TAKHPWN+MTTSADEGQFLNML+KL+ AK TMEIGVYTGYSLLATALALP+DG ILAMDINRENYELGLP I KAGV HKIDFREGPALPVLD L+ D++ HGSFDF
Sbjct:   20 ANGNGNGEQKTRHSEVGHKSLLKSDDLYQYILDTSVYPREPESMKELREITAKHPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPCINKAGVGHKIDFREGPALPVLDDLVADKEQHGSFDF 176          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT_CITNA (Caffeoyl-CoA O-methyltransferase OS=Citrus natsudaidai PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.093e-65
Identity = 120/141 (85.11%), Postives = 132/141 (93.62%), Query Frame = 3
Query:   96 GHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            GHKS LQSDAL QYILETSVYPRE ESMKELRE+TAKHPWN+M TSADEGQFLNM LKL+NAKNTMEIGVYT YSLLATALA+PDDGKILAMDINRENYE+GLP I+KAGVAH+I FREGPALPVLD L++D+KNHG++DF
Sbjct:    4 GHKSKLQSDALRQYILETSVYPREPESMKELREVTAKHPWNLMRTSADEGQFLNMSLKLINAKNTMEIGVYTDYSLLATALAIPDDGKILAMDINRENYEIGLPKIEKAGVAHRIQFREGPALPVLDQLVEDKKNHGTYDF 144          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT3_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.363e-46
Identity = 86/139 (61.87%), Postives = 111/139 (79.86%), Query Frame = 3
Query:  102 KSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            K LL+S+ LY+YILETSVYPRE E ++ELR +T  HP   M T+ D GQ + MLL LVNA+ T+E+GV+TGYSLL TAL LP+DGK++A+D+NR++YE+GLPVI+KAGV HKIDF+E  ALP LD L+ ++ N G FDF
Sbjct:    7 KGLLKSEELYKYILETSVYPREPEVLRELRNITHNHPQAGMATAPDAGQLMGMLLNLVNARKTIEVGVFTGYSLLLTALTLPEDGKVIAIDMNRDSYEIGLPVIKKAGVEHKIDFKESEALPALDELLNNKVNEGGFDF 145          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT_STELP (Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.313e-38
Identity = 80/143 (55.94%), Postives = 105/143 (73.43%), Query Frame = 3
Query:   90 EVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            EV    LLQS+ L+QYIL+TSV+PRE+E +KELR+ T  HP + M TS   GQ L+ +LK V  K T+E+GV+TGYSLLATAL++PDDGKI A+DI+RE Y +GL +I+KAGV  KI F    A+ +LD L+ D +  GS+DF
Sbjct:   12 EVKDTGLLQSEQLHQYILDTSVFPRESEHLKELRKATESHPMSFMGTSPLAGQLLSFMLKTVKPKKTIEVGVFTGYSLLATALSIPDDGKITAVDIDREAYNVGLALIKKAGVESKISFIVSDAMTLLDDLLADGRYQGSYDF 154          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 8.160e-37
Identity = 81/145 (55.86%), Postives = 106/145 (73.10%), Query Frame = 3
Query:   90 EVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNV--MTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            E+  K +L+S+AL QYI+ETS YPRE E +KELR+ T +   N+  M    DEG FL+ML+K++NAKNT+EIGV+TGYSLL TALALP+DG+I A+DI++E YE+GL  I+KAGV HKI+F     L  LD L+ D+     FDF
Sbjct:    4 EIPTKGILKSEALKQYIMETSAYPREHELLKELRKATVQKYGNLSEMEVPVDEGHFLSMLVKIMNAKNTIEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIHSDGLKALDQLVNDK---CEFDF 145          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.908e-36
Identity = 79/141 (56.03%), Postives = 106/141 (75.18%), Query Frame = 3
Query:  102 KSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNV--MTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            K +LQS+AL QYI ETS YP E E +KELRE T K   ++  M+   DEG+FL+MLLKL+NAK T+E+GV+TGYSLL+TALALP+DG++ A+D +R  YE+GLP IQKAGV  KI+F +  A P+L+ ++ ++K    FDF
Sbjct:    8 KGILQSEALKQYIYETSAYPGEHEQLKELREATTKKYGSLSGMSVPVDEGRFLSMLLKLMNAKRTLEVGVFTGYSLLSTALALPEDGQVTAIDKDRGAYEIGLPFIQKAGVEDKINFIQSEAPPILNEMLCNDK-QPEFDF 147          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CAMT2_ARATH (Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 3.790e-34
Identity = 75/141 (53.19%), Postives = 100/141 (70.92%), Query Frame = 3
Query:  102 KSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNV--MTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 518
            K +L+S+AL QYI+ET+ YPRE E +KELRE T +   N+  M    DE  FL+ML+K++NAKNT+EIGV+TGYSL   ALALP+DG+I A+DI++  Y LGL  ++KAGV HKI+F +  A+  LD L+  EK    F F
Sbjct:    8 KGILKSEALKQYIMETTAYPREHELLKELREATIQRYGNLSEMGVPVDESLFLSMLVKIINAKNTIEIGVFTGYSLFTVALALPEDGRITAIDIDQAGYNLGLEFMKKAGVDHKINFIQSDAVRGLDQLLNGEKQEYDFAF 148          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.309e-18
Identity = 51/134 (38.06%), Postives = 80/134 (59.70%), Query Frame = 3
Query:  114 QSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 515
            +   L+QY+L  S+  RE  +++ LR LT + P      + ++ Q L  L +L+ AK  +++G +TGYS LA ALALP DG+++  +++ +  ELG P+ ++A   HKID R  PAL  LD L+      G+FD
Sbjct:   50 EDSRLWQYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLA-AGEAGTFD 180          
BLAST of CX289166 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.108e-17
Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  114 QSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 515
            + + L+QY+L  S+  RE  +++ LR LT + P      + ++ Q L  L +L+ AK  +++G +TGYS LA ALALP+ G+++  +++ E  +LG P+ ++A V  KID R  PAL  LD L+      G+FD
Sbjct:   50 EDNPLWQYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPEAGRVVTCEVDAEPPKLGRPMWKQAEVEQKIDLRLQPALQTLDELLA-AGEAGTFD 180          
The following BLAST results are available for this feature:
BLAST of CX289166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT_PINTA1.801e-6885.52Caffeoyl-CoA O-methyltransferase OS=Pinus taeda GN... [more]
CAMT2_MAIZE5.240e-6879.62Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=... [more]
CAMT_CITNA1.093e-6585.11Caffeoyl-CoA O-methyltransferase OS=Citrus natsuda... [more]
CAMT3_ARATH7.363e-4661.87Probable caffeoyl-CoA O-methyltransferase At4g2622... [more]
CAMT_STELP3.313e-3855.94Caffeoyl-CoA O-methyltransferase OS=Stellaria long... [more]
CAMT1_ARATH8.160e-3755.86Putative caffeoyl-CoA O-methyltransferase At1g6798... [more]
CAMT_POPKI6.908e-3656.03Caffeoyl-CoA O-methyltransferase OS=Populus kitaka... [more]
CAMT2_ARATH3.790e-3453.19Probable caffeoyl-CoA O-methyltransferase At1g6799... [more]
CMTD1_HUMAN1.309e-1838.06Catechol-O-methyltransferase domain-containing pro... [more]
CMTD1_MOUSE1.108e-1737.31Catechol-O-methyltransferase domain-containing pro... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02009H09SK IF1 Citrus clementina cDNA clone C02009H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289166 ID=CX289166; Name=CX289166; organism=Citrus clementina; type=EST; length=519bp
GAAACTCCAAAATCCAACATCAAAAGAAAAGACTTGCGTCAATGGCTTCC
AACGCAGAAGATCAACAAAACCAACAAGGCGGACACAAGGAAGTTGGCCA
CAAGAGCCTGCTCCAATCCGATGCCCTCTACCAGTATATTCTTGAAACCA
GTGTGTACCCAAGAGAGGCTGAATCAATGAAGGAGCTTAGAGAATTGACT
GCCAAACATCCATGGAACGTTATGACAACGTCGGCAGACGAAGGGCAGTT
CTTGAACATGCTGTTGAAGCTGGTCAATGCAAAGAACACAATGGAGATTG
GAGTCTACACAGGCTACTCTCTTTTGGCCACTGCCCTTGCCCTTCCTGAT
GACGGAAAGATTTTGGCCATGGACATCAACAGAGAAAATTATGAATTGGG
GCTGCCAGTTATCCAAAAAGCTGGTGTTGCTCACAAGATTGACTTCAGAG
AAGGCCCTGCCCTGCCTGTTCTTGACCTACTGATCCAAGATGAGAAGAAC
CATGGGTCCTTTGACTTCA
back to top