CX289172

Overview
NameCX289172
Unique NameCX289172
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length523
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 5.072e-58
Identity = 113/153 (73.86%), Postives = 133/153 (86.93%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            +RE+ VY+AKLAEQAERYEEMV+FM+  V  +T   ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE +V+ +K+YRS++E+ELS +C  ILKLLDSHLVPSATA ESKVFYLKMKGDY+RYLAEFK G ERK AAENT+++Y
Sbjct:    7 SREENVYMAKLAEQAERYEEMVEFMEK-VAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAY 158          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.072e-58
Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 2
Query:   53 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            M +P RE+ VY+AKLAEQAERYEEMV+FM+ +V ++  A ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV+ +K+YRSK+ESEL+ +C  ILKLLDS L+ SA  G+SKVFYLKMKGDY+RYLAEFK G ERK AAENT+ +Y
Sbjct:    1 MASP-REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAY 156          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 6.624e-58
Identity = 112/159 (70.44%), Postives = 139/159 (87.42%), Query Frame = 2
Query:   47 SAMGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            +A  TP RE+ VY+AKLAEQAERYEEMV+FM+  V+++  + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV++++DYRSK+ESELS++C  ILKLLD+ L+PSA++G+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+  Y
Sbjct:    2 AAAHTP-REENVYMAKLAEQAERYEEMVEFMEK-VSANADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTGY 158          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 8.652e-58
Identity = 112/153 (73.20%), Postives = 132/153 (86.27%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            TRE+ VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE +V+ +K+YR+++E+ELS +C  ILKLLDSHLVPSATA ESKVFYLKMKGDY+RYLAEFK G ERK AAENT+++Y
Sbjct:    7 TREENVYMAKLAEQAERYEEMVEFMEK-VAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAY 158          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 1.476e-57
Identity = 112/161 (69.57%), Postives = 136/161 (84.47%), Query Frame = 2
Query:   53 MGTP----TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            M TP     R+++VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R N++HVSL++DYRSK+E+ELSD+C  ILKLLD+ LVP+A +G+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +Y
Sbjct:    1 MATPGASSARDEFVYMAKLAEQAERYEEMVEFMEK-VAKAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAY 160          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.927e-57
Identity = 111/157 (70.70%), Postives = 130/157 (82.80%), Query Frame = 2
Query:   53 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            M   TRE+ VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HVS +K+YR K+E+ELS +C  IL LL+SHL+P A+  ESKVFYLKMKGDY+RYLAEFK G ERK AAENT+L+Y
Sbjct:    1 MAESTREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAY 156          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.517e-57
Identity = 110/153 (71.90%), Postives = 130/153 (84.97%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            +RE+ VY+AKLAEQAERYEEMV+FM+  V   T   EL+VEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HVS +K+YR K+E+ELS +C  IL LL+SHL+PSA+  ESKVFYLKMKGDY+RYLAEFK G ERK AAENT+L+Y
Sbjct:    6 SREENVYMAKLAEQAERYEEMVEFMEK-VAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAY 157          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.517e-57
Identity = 110/153 (71.90%), Postives = 131/153 (85.62%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            +RE+ VYLAKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R N++HVS++KDYR K+E+ELS +C  IL LLDSHLVP+A+  ESKVFYLKMKGDY+RYLAEFK G ERK AAE+T+++Y
Sbjct:    4 SREENVYLAKLAEQAERYEEMVEFMEK-VAKTVDTDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAY 155          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 5.608e-57
Identity = 110/158 (69.62%), Postives = 135/158 (85.44%), Query Frame = 2
Query:   50 AMGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            A+    RE+ VY+AKLAEQAERYEEMV+FM+  V++S  + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NEEHV+ +++YRSK+E+ELS +C  ILKLLD+ L+PSA +G+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +Y
Sbjct:    2 AVAPTAREENVYMAKLAEQAERYEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAY 158          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.249e-56
Identity = 106/152 (69.74%), Postives = 133/152 (87.50%), Query Frame = 2
Query:   68 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            RE++VY+AKLAEQAERYEEMV+FM+  V+++    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R N++HV+ +++YRSK+E+ELS +C  ILKLLDS L+P+A +G+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +Y
Sbjct:    5 REEFVYMAKLAEQAERYEEMVEFMEK-VSAAVDGDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLAAY 155          
The following BLAST results are available for this feature:
BLAST of CX289172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
14336_ORYSJ5.072e-5873.8614-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14335_SOLTU5.072e-5871.3414-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
1433_PEA6.624e-5870.4414-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433A_HORVU8.652e-5873.2014-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14331_ARATH1.476e-5769.5714-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
1433E_TOBAC1.927e-5770.7014-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433_MESCR2.517e-5771.9014-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14337_ARATH2.517e-5771.9014-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
1433C_TOBAC5.608e-5769.6214-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14332_ARATH1.249e-5669.7414-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02010A05SK IF1 Citrus clementina cDNA clone C02010A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289172 ID=CX289172; Name=CX289172; organism=Citrus clementina; type=EST; length=523bp
GAAGAAGATCCAATTCCCCTCCAGTTAACTTTACAGTTTCTGCAATTCTG
CTATGGGAACCCCGACGAGAGAGCAATACGTTTACCTGGCGAAACTCGCC
GAGCAAGCCGAGCGCTATGAAGAGATGGTTAAGTTCATGGACAGCCTCGT
CACTTCCTCCACTCCGGCGACTGAACTCACCGTCGAGGAGCGCAACCTCC
TCTCCGTTGCTTACAAGAACGTCATCGGCTCTCTTCGCGCCGCGTGGCGT
ATTATCTCCTCTATCGAGCAGAAAGAGGAAGGCCGCAAGAACGAGGAACA
CGTCTCGCTGGTCAAAGACTATCGGTCAAAGGTAGAGTCTGAGTTATCTG
ACGTGTGCGGGAGCATATTGAAGTTGCTGGACTCGCACCTTGTGCCTTCG
GCTACTGCTGGTGAGTCCAAAGTCTTCTATTTGAAGATGAAGGGAGATTA
CTACCGTTACTTGGCGGAGTTTAAAGTTGGTGATGAGAGGAAGGCCGCCG
CTGAAAACACTATGTTGTCTTAT
back to top