CX289173

Overview
NameCX289173
Unique NameCX289173
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 85.5001 bits (210), Expect = 2.307e-16
Identity = 50/134 (37.31%), Postives = 78/134 (58.21%), Query Frame = 1
Query:  217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            E+    F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI  +A++ G   S  E    G N L++G + G
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSG 136          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.714e-16
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 1
Query:  235 FYRAGIAEFVATFLFLYITVLTVMGVSKS-KSKCSTVGIQG---IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            F+RA +AEF+A  LF++I++ + +G     KS  +T  +Q    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI   A++ G   S  +    G N L+ G + G
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSG 138          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.145e-15
Identity = 49/130 (37.69%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  235 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQG----IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            F+RA +AEF+A  LF++I++ + +G +       T G       ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI   A++ G   S  +    G N L+ G + G
Sbjct:   10 FWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSG 138          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.496e-15
Identity = 49/130 (37.69%), Postives = 75/130 (57.69%), Query Frame = 1
Query:  235 FYRAGIAEFVATFLFLYITVLTVMGVSKS-KSKCSTVGIQG---IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            F+RA +AEF+A  LF++I++ + +G     KS  +T  +Q    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI    ++ G   S  +    G N L+ G + G
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSG 138          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.496e-15
Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 1
Query:  217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            E+    F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI   A++ G   S  +    G N L+ G + G
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSG 136          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15
Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVG----IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            E    +F+RA IAEF+A  LF++I++   +G +    +    TVG    I  ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+ +AV Y+I QCLGA+   A++ G   S  E    G N LS G S G
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI-TSGLENNSLGLNGLSPGVSAG 140          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 4.352e-15
Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = 1
Query:  235 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQG----IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKG 612
            F+RA +AEF+A  LF++I++ + +G         T G       ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI   A++ G   S    L G   G N L+ G   G
Sbjct:   10 FWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSS----LPGNSLGLNSLAPGVDSG 138          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15
Identity = 49/130 (37.69%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  235 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG--GANMLSKGYSKG 612
            F+RA +AEF+AT LF++I++ + +G         T     +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI   A++ G   S   + G   G N L+ G + G
Sbjct:   10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS---LTGNSLGRNDLADGVNSG 136          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.266e-14
Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 1
Query:  232 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537
            +F++A  AEF+AT +F+ + V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+I QCLGAI GA ++
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL 133          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 3.684e-14
Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 1
Query:  235 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKG 612
            F+RA +AEF+A  LF++I++ + +G         T     +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI   A++ G   S    L G   G N L+ G + G
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS----LPGNSLGRNDLADGVNSG 136          
The following BLAST results are available for this feature:
BLAST of CX289173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
AQP1_RAT2.307e-1637.31Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_BOVIN6.714e-1638.46Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_CANFA1.145e-1537.69Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_SHEEP1.496e-1537.69Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE1.496e-1536.57Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQPA_RANES1.953e-1537.68Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_PIG4.352e-1538.35Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN5.683e-1537.69Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP4_MOUSE1.266e-1442.16Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP1_PONAB3.684e-1437.40Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC02010A06SK IF1 Citrus clementina cDNA clone C02010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289173 ID=CX289173; Name=CX289173; organism=Citrus clementina; type=EST; length=613bp
AATGGCACGAGGCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACC
TATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGG
ATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACC
GCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCC
GCTCTTTGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCA
TTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACA
GTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCA
GGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCA
CTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTG
TTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAAT
GCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCAGA
AAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGC
TACAGCAAGGGAG
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