CX289173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.681e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 214 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAI 519 G+ S S +A ++EF+AT LF++ V + + +K S G+ IA A +F V A ISGGH+NPAVT GL + ++L FY I QCLG+I Sbjct: 10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSI 113
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.681e-12 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S SF+RA AEF AT +++ +G S + + + +A AFG + LV ISG H+NPAVTF + ++SL RA YM Q LGA+ GAAV+ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL 104
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 214 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK 540 G+ S + +A +AEF+AT LF++ V + + +K S + G+ +A A +F V A +SGGH+NPAVT GL + +++ +FY I QCLG+ ++K Sbjct: 10 GDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK 120
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYE 564 E+ + F+R+ I+E +A+F++++I GV S S + A A G + L C ISG HINPAVT L + R +S RA Y+ QC G I GAA++ G Y+ Sbjct: 58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQ 171
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11 Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 241 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK 540 RA +AEF +TF+F++ + + + K S S + +A A +FA V + +SGGH+NPAV+FG + ++S+ RAV+Y I Q LG+I A V++ Sbjct: 21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLR 122
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11 Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S SF+RA AEF AT +++ + S + + + +A AFG + LV ISG H+NPAVTF + ++SL RA Y+ Q LGA+ GAAV+ Sbjct: 1 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL 102
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S SF+RA AEF AT +++ +G S + + + +A AFG + LV ISG H+NPAVTF + ++SL RA Y+ Q LGA+ GAAV+ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL 104
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S +F RA +AEF+AT LF++ + + + + S + IA AFG I LV +SG HINPAVT + +S RA FY+ Q LGA+ GAA++ Sbjct: 3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPPS-----VLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL 104
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.711e-11 Identity = 46/129 (35.66%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 241 RAGIAEFVATFLFLYI----TVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQ--------YEMLGGGANML 591 RA AEF +TFLF++I T+ M S S++ +A AFG +FA V+ A +SGGH+NPAVTF + +++ A+FY Q LG+ V+ Q EM G GA +L Sbjct: 18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGIL 144
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.711e-11 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S +F RA +AEF+AT LF++ + + + + S + IA AFG I LV +SG HINPAVT + +S RA FY+ Q LGA+ GAA++ Sbjct: 3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPPS-----VLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL 104 The following BLAST results are available for this feature:
BLAST of CX289173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289173 ID=CX289173; Name=CX289173; organism=Citrus clementina; type=EST; length=613bpback to top |