CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18
Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS----HGKNIVREVNIAYQSSM-MFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGLS+  P  D       HVST VKG+ GYLDPEYF   +LT+KSDVYS GVV  E +     I+      +  + E  +++Q    + S+ID N+ G+Y  E +EK+ ++A KC  DE   RP M EV+  LE +
Sbjct:  662 DFGLSKAGPSMD-----HTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLEYV 793          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNM--GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 441
            DFG SR   V         H++TVV GT GY+DPEYF + + TDKSDVYS GVV +EL+TG + IS       + +     +A + + +F +ID  +  G   S+ V    K+A KC   +   RPSM EV  EL+SI   MP  D +  E ++
Sbjct:  591 DFGTSRTVTVDH------THLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRDGCMLSQ-VTATAKVARKCLNLKGRKRPSMREVSMELDSI--RMPCGDMQLQECVS 735          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK---NIVREVNIAYQSSMMFSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 384
            DFGLSR      IEG    HVSTVV GTPGYLDPEY  T+ LT+KSDVYS G++ LE++T    I   +   +I   V +      + S++D ++   Y S  V K ++LA+ C    +  RP+MS+V+ EL
Sbjct:  721 DFGLSRSFL---IEG--ETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVVIEL 847          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 51/135 (37.78%), Postives = 86/135 (63.70%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQSSMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFG S+ AP    EG   ++VS  V+GT GYLDPEY+ T +L++KSDV+S GVV LE+++G +P++  +     ++V       ++S +  ++D G  G Y +E + + +++AL+C +  +  RP M +++RELE
Sbjct:  739 DFGFSKYAPQ---EG--DSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 868          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 51/135 (37.78%), Postives = 86/135 (63.70%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQSSMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFG S+ AP    EG   ++VS  V+GT GYLDPEY+ T +L++KSDV+S GVV LE+++G +P++  +     ++V       ++S +  ++D G  G Y +E + + +++AL+C +  +  RP M +++RELE
Sbjct:  740 DFGFSKYAPQ---EG--DSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 869          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18
Identity = 57/137 (41.61%), Postives = 78/137 (56.93%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS---------YPSECVEKFIKLALKCCQDETDARPSMSEVMREL 384
            DFGLSR  PV        +HV TVV GTPGYLDPEY+ T+ L++KSDVYS GVV LE++T  QP+ +       +N      +MF + +G++ S         Y +  V K ++LAL C    +  RP+M  V+ EL
Sbjct:  712 DFGLSRSFPVDG-----ESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTN-QPVMNKNRERPHIN----EWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMEL 838          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17
Identity = 52/137 (37.96%), Postives = 81/137 (59.12%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-----SHGKNIVREVNIAYQSSMMFSVIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SRL P+   +      ++T+V+GT GYLDPEY+ T  L +KSDVYS GVV +ELL+G + +        K++V     A + + +  +IDG  M  Y    +++  ++A++C +   + RPSM EV  ELE++
Sbjct:  551 DFGASRLIPMDQEQ------LTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEAL 681          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNMGSYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKT 426
            DFG SR   +         H++T+V GT GY+DPEYFL+ + T KSDVYS GVV +EL+TG +P+S      G+ +      A + + +  +ID  +      E V    KLA KC   +   RP+M EV  ELE I +   + D +T
Sbjct:  572 DFGTSRSVTLDQ------THLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRSSPEDLDVRT 713          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 55/136 (40.44%), Postives = 79/136 (58.09%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA------YQSSMMFSVIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS+ AP+ +       HVST VKG+ GYLDPEYF   +LTDKSDVYS GVV  E+L   +P+ + +    +VN+A      ++  M+  +ID   +G+     + KF++ A KC  +    RP M +V+  LE
Sbjct:  673 DFGLSKDAPMDE------GHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLE 801          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 56/137 (40.88%), Postives = 74/137 (54.01%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   V         H++T+V GT GYLDPEYF T + TDKSDVYS GVV +EL+TG +P S       + +V   N A + + +  ++D  +      E V    KLA +C   +   RP+M EV  ELE I
Sbjct:  564 DFGTSRSINVDQ------THLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERI 694          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
Y1357_ARATH3.255e-1842.34Probable receptor-like protein kinase At1g30570 OS... [more]
WAKLH_ARATH5.552e-1839.61Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
Y5182_ARATH7.251e-1843.18Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA7.251e-1837.78Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR7.251e-1837.78Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y5189_ARATH9.470e-1841.61Probable LRR receptor-like protein kinase At1g5189... [more]
WAK5_ARATH2.110e-1737.96Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
WAKLA_ARATH2.755e-1737.84Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
Y5613_ARATH3.599e-1740.44Probable receptor-like protein kinase At5g61350 OS... [more]
WAKLI_ARATH3.599e-1740.88Wall-associated receptor kinase-like 22 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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