CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 53/143 (37.06%), Postives = 75/143 (52.45%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY------QSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 408
            DFGL++  P  D       HVST V GT GY  PEY  T +LT KSDVYS GVV LELL+G + +   K  + +  + +          +F ++D  + G YP +       LAL+C   +   RP MSEV+ +L+ + +  P
Sbjct:  234 DFGLAKAGPTGD-----KTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLESTKP 371          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQSSMMFSVID----GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKT 426
            DFGLSRL  + +      +H+ T  +GT GYLDPEY+   +LTDKSDVYS GVV LE++T  + I   +     N+V  +N       +   ID            + +++   LA  C  +    RPSM EV  E+E I N++ +  T+T
Sbjct:  508 DFGLSRLVDLTETANN-ESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIEYIINILSQEVTET 657          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK---NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLSR   V    G   + VSTVV GT GYLDPEY+LT +L++KSDVYS G++ LE++T  + I   +   NI   V    +      ++D  + G+Y +  V + +++A+ C    +  RP+MS+V+  L+
Sbjct:  709 DFGLSRSFQV----GGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLK 837          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17
Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI------AYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 417
            DFGLS+  P  ++ G    HV+TVVKG+ GYLDPEYF   +LT+KSDVYS GVV  E+L   +P  +      +V++        +   +  +ID N+ G   +EC++KF   A KC  D    RP+M +V+  LE    +   +D
Sbjct:  659 DFGLSKTGP--NMNG---GHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCA-RPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQLQETAD 798          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 58/140 (41.43%), Postives = 79/140 (56.43%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIK----LALKCCQDETDARPSMSEVMRELESI 393
            DFGLSRL  V D+     +HV+T  +GT GYLDPEY+L  +LTDKSDVYS GVV  ELLT  + I   +     N+V  V  A +   +  VID  +G   +E   + +K    LA  C ++    RP+M    +E+E+I
Sbjct:  502 DFGLSRLG-VSDV-----SHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTMQVAAKEIENI 635          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS----------SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGLSRL           +H+ST  +GTPGYLDP+Y     L+DKSDVYS GVV  E++TG++ +   +    E+N+A  +           ++  ++D ++ ++    +    +LA +C    +D RP+M+EV  ELE I
Sbjct:  490 DFGLSRLGMTES------SHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHT-EINLAALAVDKIGSGCIDEIIDPILDLDLDAWTLSSIHTVAELAFRCLAFHSDMRPTMTEVADELEQI 623          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 52/137 (37.96%), Postives = 79/137 (57.66%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-----SHGKNIVREVNIAYQSSMMFSVIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SRL P+   +      ++T+V+GT GYLDPEY+ T  L +KSDVYS GVV +ELL+G + +        K+IV     A + + +  +IDG  M       ++K  ++A++C +   + RP M EV  ELE++
Sbjct:  553 DFGASRLIPMDKED------LATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELEAL 683          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI------AYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 417
            DFGLS+  P  ++ G    HV+TVVKG+ GYLDPEYF   +LT+KSDVYS GVV  E+L   +P  +      +V++        +   +  +ID N+ G    EC++KF   A KC  D    RP+M +V+  LE    +   +D
Sbjct:  663 DFGLSKTGP--NMNG---GHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCA-RPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLEFALQLQETAD 802          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16
Identity = 58/141 (41.13%), Postives = 75/141 (53.19%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-----SHGKNIVREVN-IAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 402
            DFGL++  P+ D      +HVST V GT GY  PEY  T  LT KSDVYS GVV LELL+G + +     S  +N+V            +F VID  +   Y  E   K   L+L+C   E   RP+MSEV+  LE I ++
Sbjct:  221 DFGLAKDGPIGD-----KSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSL 356          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF------SVIDGNMGSYPSE-CVEKFIKLALKCCQDETDARPSMSEVMRELES 390
            DFGL++L    +      +H++T V GT GY+ PEY  T  L +KSD+YS GV+ LE +TG  P+ +G+    EVN+     MM        V+D  +   PS+  +++ + ++L+C   E + RP MS+V R LES
Sbjct:  327 DFGLAKLLDSGE------SHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRP-ANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLES 456          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
APK2B_ARATH3.599e-1737.06Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
WAKLQ_ARATH6.138e-1735.76Wall-associated receptor kinase-like 20 OS=Arabido... [more]
MEE39_ARATH6.138e-1738.35Probable LRR receptor-like serine/threonine-protei... [more]
ANX1_ARATH8.017e-1738.36Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
WAKLP_ARATH1.047e-1641.43Wall-associated receptor kinase-like 15 OS=Arabido... [more]
WAKLO_ARATH1.367e-1635.46Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAK4_ARATH1.367e-1637.96Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
ANX2_ARATH1.367e-1638.36Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
APK1A_ARATH1.786e-1641.13Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y2296_ARATH5.196e-1637.23Probable receptor-like protein kinase At2g42960 OS... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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