CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   +         H +TV+ GT GY+DPEY+ + + T+KSDVYS GV+  EL+TG +P+   +N      +     +A +   +  +ID  +      E V    K+A+KC   +   RP+M EV  ELE I
Sbjct:  597 DFGTSRSVTIDQ------THWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERI 728          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS----HG-KNIVREVNIAYQSSMMF-SVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 399
            DFGL++L P  D      +HVST V GT GY  PEY +T +LT KSDVYS GVVFLEL+TG + I     HG +N+V      +     F  + D  + G +P+  + + + +A  C Q++   RP +++V+  L  + N
Sbjct:  231 DFGLAKLGPTGD-----KSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLAN 365          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-----ISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 390
            DFGL++L  + D E    +H++T+V GT GYL PEY  + + T+K+DVYS GV+ LE+L+G  P     I  G NIV  +N     +    ++D +      E ++  + +A KC     D RP+M  V++ LES
Sbjct:  445 DFGLAKL--LEDEE----SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLES 573          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 56/138 (40.58%), Postives = 74/138 (53.62%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI--SHGKNIVREVNIAY----QSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGL++  P  D       HVST V GT GY  PEY  T +LT KSDVYS GVV LEL++G + +  S+G N    V+ A         +F ++D  + G YP +       LAL+C   +   RP MSEV+  LE +
Sbjct:  237 DFGLAKAGPTGD-----NTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQL 369          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.787e-16
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGLS++    +      +++S  +KGT GYLDPEY  THKLT+KSDVY+ GVV LE+L     I         N+   V        +  ++D ++ G   +  ++KF+++A KC ++  D RPSM +V+ +LE +
Sbjct:  631 DFGLSKIHNQDE------SNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLEYV 761          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.787e-16
Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNMGSYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   +         H++T+V GT GY+DPEYFL+ + TDKSDVYS GVV +EL+TG +P+S      G+ +      A + + +  +ID  +      + +    KLA KC   +   RP+M E   ELE I
Sbjct:  575 DFGTSRSVTIDQ------THLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELERI 705          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.787e-16
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL---TGMQPISHGKNI-VREVNIAYQ-SSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS+  P  D       HVST VKG+ GYLDPEYF   +LT+KSDVYS GVV +E+L     + P+   + + + E  +A+Q   ++  ++D N+ G      ++KF + A KC  +    RPSM +V+  LE
Sbjct:  652 DFGLSKTGPSLD-----QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLE 781          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 50/142 (35.21%), Postives = 77/142 (54.23%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFI----KLALKCCQDETDARPSMSEVMRELESIWN 399
            DFGLSRL P+         HVST  +GTPGY+DP+Y L ++L++KSDVYS  VV +EL++ +  +   +     N+     +  Q+  +  ++D ++G      V + +    +LA +C Q + D RP MS V   L  I N
Sbjct:  486 DFGLSRLFPMDK------THVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVDITRPRQEINLSNMAVVKIQNHELRDMVDPSLGFDTDTRVRQTVIAVAELAFQCLQSDKDLRPCMSHVQDTLTRIQN 621          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK----NIVREVNIAYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGLSR   V   EG     +STVV G+ GYLDPEY+ T ++ +KSDVYSLGVV LE++TG   I+  K    +I   V     +  +  ++D  +   Y      K  ++AL C +  +  RP+MS+V+ EL+ I
Sbjct:  715 DFGLSRSFSV---EG--SGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIASSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQI 845          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 57/137 (41.61%), Postives = 74/137 (54.01%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIA------YQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS+  P  D       HVST VKG+ GYLDPEYF   +LTDKSDVYS GVV  E+L     I     + RE VN+A       +   +  +ID ++ G+   + + KF +   KC  D    RPSM +V+  LE
Sbjct:  627 DFGLSKTGPELD-----QTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVID--PTLPREMVNLAEWAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLE 756          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
WAKLN_ARATH5.196e-1635.51Wall-associated receptor kinase-like 18 OS=Arabido... [more]
PBS1_ARATH5.196e-1638.57Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
FEI2_ARATH5.196e-1637.04LRR receptor-like serine/threonine-protein kinase ... [more]
APK2A_ARATH5.196e-1640.58Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y2232_ARATH6.787e-1636.50Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLE_ARATH6.787e-1637.96Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
THE1_ARATH6.787e-1640.00Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y1839_ARATH8.864e-1635.21Probable serine/threonine-protein kinase At1g18390... [more]
SIRK_ARATH8.864e-1639.71Senescence-induced receptor-like serine/threonine-... [more]
HERK_ARATH8.864e-1641.61Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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