CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15
Identity = 57/136 (41.91%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA------YQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS+     D+      HVST VKG+ GYLDPEYF   +LTDKSDVYS GVV LE L   +P  + +    +VN+A       Q  ++  +ID ++ G+   E ++KF + A KC  D    RP+M +V+  LE
Sbjct:  667 DFGLSK-----DV-AFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCA-RPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLE 795          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 56/136 (41.18%), Postives = 79/136 (58.09%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA------YQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS+     D+      HVST VKG+ GYLDPEYF   +LTDKSDVYS GVV LE L   +P  + +    +VN+A       +  ++  +ID ++ G+   E ++KF + A KC +D    RP+M +V+  LE
Sbjct:  668 DFGLSK-----DV-AFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCA-RPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLE 796          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 52/137 (37.96%), Postives = 71/137 (51.82%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   V         H++TVV GT GY+DPEYF + + TDKSDVYS GVV  EL+TG + +S       + +     +A + + +  +ID  +        V    K+A KC   +   RPSM +V  ELE I
Sbjct:  577 DFGTSRTVTVDH------THLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKI 707          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH-----GKNIVREVNIAYQSSMMFSVIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SRL P+   +      ++T+V+GT GYLDPEY+ T  L +KSDVYS GVV +ELL+G + +        KN+V     A +++    +IDG  M       +++  ++A +C +   + RP M EV  ELE++
Sbjct:  547 DFGASRLIPMDKEQ------LTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMKEVAAELEAL 677          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 54/139 (38.85%), Postives = 72/139 (51.80%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH-----GKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 399
            DF LS  AP      +     ST V GT GY  PEY +T +L  KSDVYS GVV LELLTG +P+ H      +++V           +   +D  + G YP + V K   +A  C Q E D RP+MS V++ L+ + N
Sbjct:  221 DFDLSNQAP-----DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLN 354          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 57/142 (40.14%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGM---------QPISHGK---NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 390
            DFGL++  P    EG+   H+ST V GT GY+ PEY L  +LT+KSDVYS GVV LELL+           QP+S      ++VRE         +  V DG     P E +EK++ +A+ C   +  ARP+M +V++ LES
Sbjct:  430 DFGLAKFNP----EGMT--HMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVRE------GQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLES 559          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 53/143 (37.06%), Postives = 76/143 (53.15%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFI------------KLALKCCQDETDARPSMSEVMRELESI 393
            DFGLSRL    D E    +H+ST  +GTPGYLDP+Y    +L+DKSDVYS GVV +E+++G + I   +    EVN+A  S  +  +  G +      C+ K I            +LA +C     + RP+M E+  +L  I
Sbjct:  455 DFGLSRLGMSTDFEA---SHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRP-YSEVNLA--SLAVDRIGRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTMVEITEDLHRI 591          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-----ISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 390
            DFGL++L  + D E    +H++T+V GT GYL PEY  + + T+K+DVYS GV+ LE+L+G +P     I  G N+V  +           ++D N      E ++  + +A +C     + RP+M  V++ LES
Sbjct:  447 DFGLAKL--LEDEE----SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLES 575          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF------SVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVM 375
            DFGLSR     D+      HVS+V KGT GYLDPEY+ + +LT+KSDVYS GVV  ELL+G +P+S  ++   E+NI + +  +        +ID  + S    E V +  ++A +C +     RP M EV+
Sbjct:  749 DFGLSRQTE-EDL-----THVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVS-AEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVI 873          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI---SHGKNIVR-------EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 384
            DFGL++      ++G     +S++  G+ GY+ PEY  T K+ +KSDVYS GVV LEL+ G +P+     G +IVR       E+     ++++ +++D  +  YP   V    K+A+ C ++E  ARP+M EV+  L
Sbjct:  835 DFGLAKFL----VDGAASECMSSIA-GSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
Y2214_ARATH1.158e-1541.91Probable receptor-like protein kinase At2g21480 OS... [more]
Y4391_ARATH1.512e-1541.18Probable receptor-like protein kinase At4g39110 OS... [more]
WAKLJ_ARATH1.512e-1537.96Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAK2_ARATH1.512e-1537.23Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
Y2706_ARATH2.579e-1538.85Probable receptor-like protein kinase At2g47060 OS... [more]
RKF3_ARATH2.579e-1540.14Probable LRR receptor-like serine/threonine-protei... [more]
WAKLR_ARATH3.368e-1537.06Wall-associated receptor kinase-like 21 OS=Arabido... [more]
FEI1_ARATH3.368e-1534.81LRR receptor-like serine/threonine-protein kinase ... [more]
Y1677_ARATH4.399e-1540.15Probable LRR receptor-like serine/threonine-protei... [more]
CLV1_ARATH4.399e-1534.78Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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