CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.745e-15
Identity = 56/137 (40.88%), Postives = 73/137 (53.28%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIA------YQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS+  P  D       HVST VKG+ GYLDPEYF   +LT+KSDVYS GVV  E+L     I     + RE VN+A       +   +  +ID ++ G    + + KF +   KC  D    RPSM +V+  LE
Sbjct:  624 DFGLSKTGPEID-----QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVID--PTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLE 753          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.745e-15
Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTK 423
            DFG SR   +         H +TV+ GT GY+DPEY+ + + T+KSDVYS GV+  EL+TG +P+   +N      +     +A +   +  ++D  +      E V     LA+KC       RP+M EV  ELE I     +S  +
Sbjct:  588 DFGTSRSVTIDQ------THWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELERICTSPEDSQVQ 729          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.745e-15
Identity = 53/140 (37.86%), Postives = 69/140 (49.29%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC----VEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   +         H++T V GT GY+DPEYF + K TDKSDVYS GVV +EL+TG  P S       +        A + +    ++D  +     EC    V    KLA +C   +   RP+M EV  ELE I
Sbjct:  567 DFGTSRSVTIDQ------THLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERI---KDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVELERI 697          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.745e-15
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG--SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 429
            DFG+++  P          + ST V GT GY+DPEY  T +L +KSD+YS G+V LELLTG + + +  N+ + +      + +   +D  +      S  ++K  +LAL C +     RP+M EV R L S+    P     +P
Sbjct:  794 DFGIAKSIPA------TKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDNEANLHQMILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRNPLERPTMQEVSRVLLSLVPSPPPKKLPSP 932          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.745e-15
Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM------MFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGL++  P  D      +HVST + GT GY  PEY  T  LT KSDVYS GVV LE+L+G + +   +    +  + +   +      +F VID  +   Y  E   K   LAL+C   E   RP+M+EV+  LE I
Sbjct:  222 DFGLAKDGPTGD-----KSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHI 354          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 47/138 (34.06%), Postives = 77/138 (55.80%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE------VNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGL++L    D      +HV+T V+GT G++ PEY  T + ++K+DV+  GV+ LEL+TG + I  G   VR+      V           ++D ++ G +    +E+ ++LAL C Q   + RP MS+V++ LE +
Sbjct:  444 DFGLAKLLDQRD------SHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGL 575          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKN----IVREVNIAYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL++L    D E     H+ST + GT GY+ PEY +   LTDK+DVYS G+V LE++ G    I   KN    ++  V +  + + +  ++D  +GS Y  E     I++A+ C   E   RPSMSEV++ LE
Sbjct:  768 DFGLAKL----DEED--STHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSVIDGNM--GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   +         H +TV+ GT GY+DPEY+ + + TDKSDVYS GVV +EL+TG +P+    N      +     +A + +  F ++D  +  G  P E V     LA +C   +   RP M +V  +LE I
Sbjct:  594 DFGTSRSVTIDH------THWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRGLADHFRVAMKENRFFEIMDARIRDGCKP-EQVMAVANLARRCLNSKGKKRPCMRKVFTDLEKI 725          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKT 426
            DFG SR             H++T+V GT GY+DPEYFL+ + T KSDVYS GVV +EL+TG +P+S      G  +      A + +    +ID  +    S+ V    KLA +C   + + RP+M EV  +LE I +   + D  T
Sbjct:  571 DFGTSRSVATDQ------THLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKD-ESKQVMAVAKLARRCLNRKGNKRPNMREVSIKLERIRSSPKDLDVHT 710          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15
Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 1
Query:   64 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH-----GKNIVREVNIAYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKT 426
            ST V GT GY  PEY +T ++T KSDVYS GVV LELLTG +P+ H      +++V           +   ID  + + +P + V K   +A  C Q E D RP+M+ V++ L+ + N  P     T
Sbjct:  238 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPEST 364          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
Y5597_ARATH5.745e-1540.88Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLM_ARATH5.745e-1533.11Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLD_ARATH5.745e-1537.86Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
ERL2_ARATH5.745e-1533.10LRR receptor-like serine/threonine-protein kinase ... [more]
APK1B_ARATH5.745e-1538.41Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5457_ARATH7.503e-1534.06Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH7.503e-1538.52Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH7.503e-1535.97Putative wall-associated receptor kinase-like 11 O... [more]
WAKLC_ARATH7.503e-1536.73Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y2197_ARATH9.800e-1537.80Probable protein kinase At2g41970 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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