CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS-----VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGL+RL  V D      +HVSTV+ GT GY+ PEY  T + T + DVYS GV+ +EL TG + +  G+  + E      +  M +      + G      +E + + +K+ +KC  D   ARP+M EV+  L  I
Sbjct:  959 DFGLARLLNVGD------SHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDGGEECLVEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAMLVKI 1088          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-------NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL++L    D      +HV+T V+GT G++ PEY  T K ++K+DV+  GV+ LEL+TG +     +        ++  V    +   + S++D  + G Y    VE+ I++AL C Q     RP MSEV+R LE
Sbjct:  420 DFGLAKLMNYND------SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 550          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-------NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL++L    D      +HV+T V+GT G++ PEY  T K ++K+DV+  GV+ LEL+TG +     +        ++  V    +   + S++D  + G Y    VE+ I++AL C Q     RP MSEV+R LE
Sbjct:  439 DFGLAKLMNYND------SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 569          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-------NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL++L    D       HV+T V+GT G++ PEY  T K ++K+DV+  GV+ LEL+TG +     +        ++  V    +   + +++D ++ G+Y  E VE+ I++AL C Q     RP MSEV+R LE
Sbjct:  434 DFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK---NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI------WNMMPESDTKTP 429
            DFGLSR   + +          TVV GT GYLDPEY  T  L+ KSDVYS GVV LE+++G   I   +   NIV   +   ++  + S++D N+   Y +    K ++LA+ C    +  RP+MS+V+  L         W    E D  +P
Sbjct:  702 DFGLSRSFLIGN------EAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVLNECLETCEKWRKSQEVDLSSP 848          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14
Identity = 52/140 (37.14%), Postives = 71/140 (50.71%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC----VEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   +         H++T V GT GY+DPEYF + K T+KSDVYS GVV +ELLTG +P S       + +      A + + +  ++D  +     EC    V     LA +C   +   RP+M EV  ELE I
Sbjct:  559 DFGTSRSVTIDQ------THLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRI---KDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELEMI 689          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14
Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH-----GKNIVREVNIAYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DF LS  AP      +     ST V GT GY  PEY +T +L+ KSDVYS GVV LELLTG +P+ H      +++V           +   +D  + + YP + + K   +A  C Q E D RP+MS V++ L+ +
Sbjct:  216 DFDLSNQAP-----DMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQPL 347          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 46/137 (33.58%), Postives = 82/137 (59.85%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-----SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC-VEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG S+L P+   +      ++T+V+GT GYLDPEY+ T  L +KSDVYS GVV +EL++G + +        K++V    +A + + +  +ID  + +  ++  + +  ++A++C + + + RP M EV  ELE++
Sbjct:  251 DFGASKLKPMDKEQ------LTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELETL 381          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 50/140 (35.71%), Postives = 78/140 (55.71%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI-------AYQSSMMFSVIDGNMGSYPSEC----VEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFG+SR   + D       H++T+V+GT GY+DPEY  ++  T KSDVYS GV+ +ELLTG +P+S  +   +EV +       A ++  +  ++D  +     EC    V    KLA +C    ++ RP+M +V  EL+
Sbjct:  533 DFGISRSVAIDD------THLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRR--QEVRMLGAYFLEAMRNDRLHEILDARI---KEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFIELD 661          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 49/138 (35.51%), Postives = 69/138 (50.00%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI------SHGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SR   +         H +TV+ GT GY+DPEY+ +   T+KSDVYS GVV +EL+TG +P+           +     +A + + +F +ID  +      E V     LAL+C +     RP M EV   LE I
Sbjct:  597 DFGTSRSVSIDH------THWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREVSTALERI 728          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
Y1743_ARATH1.280e-1436.03Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH1.280e-1435.77Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH1.280e-1435.77Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
BAK1_ARATH1.280e-1435.77BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y1755_ARATH1.672e-1435.29Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH1.672e-1437.14Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
PTI1_SOLLC1.672e-1437.23Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
WAKLS_ARATH2.183e-1433.58Putative wall-associated receptor kinase-like 16 O... [more]
WAKLG_ARATH2.183e-1435.71Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLL_ARATH2.851e-1435.51Putative wall-associated receptor kinase-like 13 O... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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