CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 45/133 (33.83%), Postives = 77/133 (57.89%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP---ISHGKNIVREVNIAYQSSMMFSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL+RL P          H+ST + GT GY+ PEY +  KLT+K+DVYS GV+ +E++TG +    +    +I++ V   Y++S +   +D  +G ++      + +++ L C Q   D RP+MS V++ ++
Sbjct:  466 DFGLARLFPEDK------THISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMK 592          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 48/137 (35.04%), Postives = 77/137 (56.20%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-------NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL++L  V         +V+T V+GT G++ PEY  T K ++++DV+  G++ LEL+TG + I   +        ++  V    +   + +++D N+ G Y  E VE  I++AL C Q   + RP MSEV+R LE
Sbjct:  435 DFGLAKLVDVRR------TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLE 565          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-----SHGKNIVREVNIAYQSSMMFSVIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG SRL P+   E      + T+V+GT GYLDPEY+ T  L +KSDVYS GVV +ELL+G + +        K++V     A + + +  +I G  M     + +++  ++A +C +   + RP M EV  +LE++
Sbjct:  552 DFGASRLIPMDKEE------LETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLEAL 682          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-----HGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS+  P  D       HVST VKG+ GYLDPEY    +LT+KSDVYS GVV LE++ G   I         N++       +   +  +ID  + G    E V+K+ ++  KC       RP+M +++  LE
Sbjct:  630 DFGLSKTGPDLD-----QTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLE 759          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 46/136 (33.82%), Postives = 80/136 (58.82%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE------VNIAYQSSMMFSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL++L    D      +HV+T V+GT G++ PEY  T + ++K+DV+  G++ LEL+TGM+ +  GK++ ++      V   ++   +  ++D  +G +Y    V + +++AL C Q     RP MSEV++ LE
Sbjct:  440 DFGLAKLLNHED------SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLE 569          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 53/139 (38.13%), Postives = 73/139 (52.52%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA-------YQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGL+R  P+ D      +HVST V GT GY  PEY  T  L+ KSDVYS GVV LELL+G + I   +  V E N+             +  V+D  + G Y      K   LAL C   +  +RP+M+E+++ +E +
Sbjct:  221 DFGLARDGPMGD-----NSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQP-VGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI--SHGKN-----IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFGL+++     ++    A    +VKGT GY+ PEY  T K+ +KSDVYS GVV +EL+TG +P+    G+N      V  V+      MM  +ID ++     E   K + +AL C      ARP M  V+  LE I
Sbjct:  832 DFGLAKIIQADSVQRDFSA---PLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKEDALKVLTIALLCTDKSPQARPFMKSVVSMLEKI 966          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELES 390
            DFG+++   V        +H ST V GT GY+DPEY  T +LT+KSDVYS G+V LELLT  + +    N+   +     ++ +  + D ++ S   +   V+K  +LAL C + + + RP+M +V R L S
Sbjct:  791 DFGIAKSLCVSK------SHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVDDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVLGS 916          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVS-TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-----SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVE--KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 420
            DFG++RL    D       H+S + + GTPGY+ PEY+ + + T K DVYS GV+ LELL+G +PI         N+V      Y+      ++D  + +  S  VE   ++K+A +C  D    RP+M +VM   + +  +  E+D+
Sbjct: 1003 DFGMARLVSALD------THLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFKELVQVDTENDS 1144          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.352e-14
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQSSMMF-SVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW------NMMPESDTKTPEF 435
            DFGL+++ P  D       HVST V GT GY  P+Y +T +LT KSD+YS GVV LEL+TG + I + K     N+V      ++    F  ++D  + G YP   + + + ++  C Q++   RP +S+V+  L  +       N    S  K P F
Sbjct:  248 DFGLAKVGPSGD-----KTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYDPNSPSSSSGKNPSF 400          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
CRK3_ARATH2.851e-1433.83Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y5129_ARATH3.724e-1435.04Probable LRR receptor-like serine/threonine-protei... [more]
WAK1_ARATH3.724e-1435.77Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
Y2393_ARATH4.864e-1437.04Probable receptor-like protein kinase At2g39360 OS... [more]
Y2239_ARATH4.864e-1433.82Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH4.864e-1438.13Probable serine/threonine-protein kinase NAK OS=Ar... [more]
IKU2_ARATH4.864e-1436.96Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
ERECT_ARATH4.864e-1436.36LRR receptor-like serine/threonine-protein kinase ... [more]
BRL3_ARATH4.864e-1433.11Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
RLCK7_ARATH6.352e-1434.18Probable serine/threonine-protein kinase RLCKVII O... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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