CX289180

Overview
NameCX289180
Unique NameCX289180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.352e-14
Identity = 52/153 (33.99%), Postives = 79/153 (51.63%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVS-TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF--IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 435
            DFG++RL    D       H+S + + GTPGY+ PEY+ + + T K DVYS GV+ LELL+G +PI  G+     N+V      Y+      ++D  + +  S  VE F  +K+A +C  D    RP+M ++M   + +     E D    EF
Sbjct: 1005 DFGMARLVSALD------THLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFKEM-KADTEEDESLDEF 1150          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 54/134 (40.30%), Postives = 72/134 (53.73%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS---HGKNIVREVNIAYQSSMMFSVIDGNMGSYPS--ECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLS L P           +S +  GT GYLDPEY+  H LT KSDVYS GVV LE+L+G + I       NIV       ++  +F+++D  + S PS  E ++K   +A KC +     RPSM +V   LE
Sbjct:  652 DFGLSILGPADS-----GTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEWAVPLIKAGDIFAILDPVL-SPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALE 779          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI----SHGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGLSR       +G   +  ST + GT GYLDPE + + +L +KSDVYS G+V LE++T  QP+    S   +I + V        +  ++D N+   Y      + ++LA+ C    +  RPSMS+V+ EL+
Sbjct:  707 DFGLSR-----SFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITN-QPVINQTSGDSHITQWVGFQMNRGDILEIMDPNLRKDYNINSAWRALELAMSCAYPSSSKRPSMSQVIHELK 834          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC--VEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG+++  P          H ST V GT GY+DPEY  T ++ +KSD+YS G+V LELLTG + + +  N+ + +      + +   +D  +     +   + K  +LAL C +     RP+M EV R L S+
Sbjct:  791 DFGIAKSIPASK------THASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVLLSL 917          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 51/141 (36.17%), Postives = 73/141 (51.77%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE------------VNIAYQSSMMFSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 384
            DFGLSR            +HVST+V GTPGYLDP  F T+ L +KSD+YS GVV LE++T       GK +++E            ++I   ++ + +VID  M   +    V K ++LAL         RP+M  ++R L
Sbjct:  711 DFGLSRSFHTES-----RSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMIT-------GKTVIKESQTKRVHVSDWVISILRSTNDVNNVIDSKMAKDFDVNSVWKVVELALSSVSQNVSDRPNMPHIVRGL 839          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 46/137 (33.58%), Postives = 80/137 (58.39%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-----SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 393
            DFG S+L P+   +      ++T+V+GT GYLDPEY+ T  L +KSDVYS GVV +ELL+G + +        K++V     A + + +  +ID  + +  + + +++  ++A +C +   + RP M EV  +LE++
Sbjct:  558 DFGASKLIPMDKEQ------LTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLEAL 688          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-------NIVREVNIAYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 387
            DFGL+RL    D       HV+T V+GT G++ PEY  T K ++K+DV+  G++ LEL+TG +     +        ++  V    +   +  ++D ++ S Y    VE+ I++AL C Q     RP MSEV+R LE
Sbjct:  450 DFGLARLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 580          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG-----KNIVREVNIAYQSSMMFSVIDGNM---GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 390
            DFGLS++ P  + +    +H+S    GT GY+DPEY+   +LT KSDVYS GVV LELL+G + I +      +N+V  V           ++D  +     Y  E V     LA +C    +  RPSM EV+ +LES
Sbjct:  597 DFGLSQMGPTEEDD---VSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDEAHRILDQRIPPPTPYEIEAVAHVGYLAAECLMPCSRKRPSMVEVVSKLES 731          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 54/153 (35.29%), Postives = 78/153 (50.98%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE------VNI------AYQSSMMFSVIDGNMGS---YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 414
            DFGLS + PV   +   P    T   GT GY+DPEY+  + LTDKSDVY LGVV LELLTG + I      V E      V++      A  +  + +++D  +GS      + VE     A+ C   E   RP+M++++  LE   ++  +S
Sbjct:  649 DFGLSLMGPVLGKDHN-PYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEEEEGCVPVHLVDYSVPAITADELSTILDPRVGSPELGEGDAVELVAYTAMHCVNAEGRNRPTMTDIVGNLERALDLCGDS 800          
BLAST of CX289180 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13
Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 1
Query:    1 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA-----YQSS--MMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMREL 384
            DFGL+R  P+ +      ++VST V GT GY  PEY  T  L  +SDVYS GVV LELL G Q + H +   +E N+      Y +S   +  ++D  + S Y  E   +   +A++C   E  +RP+M +V+R L
Sbjct:  215 DFGLARDGPMGE-----QSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRP-AKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL 344          
The following BLAST results are available for this feature:
BLAST of CX289180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
BRL1_ARATH6.352e-1433.99Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
CRI4_MAIZE8.296e-1440.30Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
RLK7_ARATH1.084e-1335.82Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
ERL1_ARATH1.084e-1333.83LRR receptor-like serine/threonine-protein kinase ... [more]
Y1570_ARATH1.415e-1336.17Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH1.415e-1333.58Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
SERK2_ARATH1.848e-1335.04Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
ACCR4_ARATH1.848e-1337.68Serine/threonine-protein kinase-like protein CCR4 ... [more]
ACCR3_ARATH1.848e-1335.29Putative serine/threonine-protein kinase-like prot... [more]
Y3545_ARATH2.414e-1337.50Probable receptor-like protein kinase At3g55450 OS... [more]

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Properties
Property NameValue
Genbank descriptionC02010B02SK IF1 Citrus clementina cDNA clone C02010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289180 ID=CX289180; Name=CX289180; organism=Citrus clementina; type=EST; length=617bp
GATTTTGGACTTTCACGACTTGCACCGGTTCCTGATATTGAAGGAATTGT
ACCAGCTCATGTATCCACAGTTGTCAAGGGGACTCCGGGTTATCTTGATC
CAGAGTACTTCTTAACTCATAAATTGACCGACAAGAGTGATGTGTATAGC
CTTGGAGTGGTATTTTTGGAACTCTTGACTGGTATGCAGCCAATCTCCCA
TGGCAAAAACATTGTTCGAGAGGTAAATATTGCGTATCAATCTAGTATGA
TGTTCTCAGTGATTGATGGGAATATGGGTTCTTATCCTTCGGAATGTGTG
GAGAAATTCATTAAACTGGCCTTGAAATGTTGTCAAGATGAGACAGATGC
AAGACCTTCAATGTCGGAGGTTATGAGAGAACTCGAGAGCATATGGAATA
TGATGCCGGAGTCTGATACAAAAACTCCTGAATTCATAAATAGTGAACAC
ACATCAAAGGAAGAAACTCCACCGTCTTCATCCTCAATGCTGAAGCACCC
ATATGTTTCATCAGATGTCTCTGGTAGCAATCTTGTTAGTGGAGTCATCC
CTACCATTACACCTAGATAAAATCCGAACTGAGAAAATTTTTTATTACTA
CTTTTGAGCAGGCAATG
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