CX289183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: NOG2_NEUCR (Nucleolar GTP-binding protein 2 OS=Neurospora crassa GN=nog-2 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17 Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = 2 Query: 5 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQG 400 V PG T+ Q V L + + L+DCPG+V + + LR R+E +D+P + +LN+ + + Y+L + FL+ +A G+L KGG DV+ A+++L+D+ GKIP++T P +++G Sbjct: 353 VAPIPGETKVWQYVTLMRRIYLIDCPGIVPPNQNDTPQDLLLRGVVRVENVDNPEQYIPAVLNKVKPHHMERTYELKGWKDHIHFLEMLARKGGRLLKGGEPDVDGVAKMVLNDFMRGKIPWFTPAPEKEEG 484
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: NOG2_CRYNV (Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var. grubii GN=NOG2 PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.859e-16 Identity = 53/192 (27.60%), Postives = 89/192 (46.35%), Query Frame = 2 Query: 5 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDS-------VDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARIVS------------ELGKEFNVNEVYKNESSFIGSLKSVDDFQPVE 523 V PG T+ Q + L + + L+DCPG+V + + ++D L+ R+E L P + +L R L Y L + L +A GKL KGG D EAAA+++L+DW GK+P++ PP + + ++A + S EL +E E+ + + +G + + + VE Sbjct: 356 VAPIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLATPAEHIPALLERVRPEYLERTYGLEHVEGGWHGEEGATFVLTAIAKKSGKLLKGGEPDQEAAAKMVLNDWIRGKVPFFVAPPTKPES-GADAHVSSATTEKVQEQEQKELAEEKETKEMLEEQERSLGKVLGIKRVKGVE 546
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: NOG2_PNECA (Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.086e-15 Identity = 41/128 (32.03%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDS-VDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMP 382 N PG T+ Q V++ + ++DCPG+V S +++ I ++ RIEK+ +P + ILN C L Y++ +++ F++ +A GKL KGG VD + A+++++D+ GKIP++ P Sbjct: 319 NTAPIPGETKVWQYVRMTSKIFMIDCPGIVPPNSNDSETEIIIKGALRIEKVSNPEQYIHAILNLCETKHLERTYQISGWENDSTKFIELLARKTGKLLKGGEVDESSIAKMVINDFIRGKIPWFIAP 446
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3_XENTR (Guanine nucleotide-binding protein-like 3 OS=Xenopus tropicalis GN=gnl3 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 3.161e-15 Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPP 385 NVG T G TR +QEV+LD +++LD P +V+ +A +A+ + D + V IL C L+ Y LP + + + + +A RG LKKGG+ D EAA R++ +DW ++ YY PP Sbjct: 274 NVGPTKGTTRVLQEVRLDPQIRMLDSPALVV---SPQNAPLAVMLRSVSDCNVDVLAAVSAILKHCSKQELMLHYTLPDYRNSLECVTLLAQRRGLLKKGGVPDTEAAGRLLFNDWMGVRMKYYCQPP 398
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3_XENLA (Guanine nucleotide-binding protein-like 3 OS=Xenopus laevis GN=gnl3 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.042e-15 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEAR-IVSELGKEFNVNEVYKNESSFIGSLK 496 NVG + G T+ +QEV+LD ++LLD P +++ ++ +AL E D + V+ IL C L+ Y + + + + L +A RG LKKGG+ D E A R++ +DW ++ YY PP P +R +V+ + E+ + +S + +LK Sbjct: 274 NVGPSKGTTKFLQEVRLDPQIRLLDSPALLV---SPHNPPVALMLRSASESKVDVLAAVEAILKHCSKQELMLHYTIADYRNSLECLTLLAHRRGMLKKGGVPDTEGAGRLLFNDWMGARMKYYCRPPDSPVCQPHISREVVAAMSSGICSEELAMDNASTLKALK 436
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: Y1464_METJA (Uncharacterized GTP-binding protein MJ1464 OS=Methanocaldococcus jannaschii GN=MJ1464 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.495e-14 Identity = 43/125 (34.40%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 8 GATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCP--ANLLISLYKLPSFDSVD-DFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYY 373 G+ GLT+ Q V+L KN+KL+D PGV+ ++ ++ + + R+EK+++P+ P +IL+R N +I Y ++ VD + L+K+ R L KGG VD+ A+ I+ ++ +GK+ YY Sbjct: 139 GSVAGLTKGEQWVRLTKNIKLMDTPGVLEMR---DEDDLVISGALRLEKVENPIPPALKILSRINNFDNSIIKEYFGVDYEEVDEELLKKIGNKRSYLTKGGEVDLVRTAKTIIKEYQDGKLNYY 260
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: NUG1_YEAST (Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae GN=NUG1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.124e-12 Identity = 57/204 (27.94%), Postives = 97/204 (47.55%), Query Frame = 2 Query: 5 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSG------ENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLIS-----LYKLPSFDSVD------DFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMP----PARDQG----------------IPSEARIVSELGKEFNVNEVYKNESSFIGSLKSVD 505 VG G+T S++E+++D +K+LD PG+ E++A +AL N + + DP V ++ R + ++ LY++P + D FL VA RG+L KGGI ++ +A +L+DW +GKI + +P A Q +E+ IVSE KEF+++ ++ + I + K D Sbjct: 313 VGNEAGVTTSLREIKIDNKLKILDSPGICFPSENKKRSKVEHEAELALLNALPAKHIVDPYPAVLMLVKRLAKSDEMTESFKKLYEIPPIPANDADTFTKHFLIHVARKRGRLGKGGIPNLASAGLSVLNDWRDGKILGWVLPNTSAAASQQDKQNLSTINTGTKQAPIAANESTIVSEWSKEFDLDGLFSSLDKAIDASKDQD 516
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: LSG1_YEAST (Large subunit GTPase 1 OS=Saccharomyces cerevisiae GN=LSG1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.723e-11 Identity = 44/163 (26.99%), Postives = 69/163 (42.33%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKL------------PSFDSVDDFLQKVATVRGKLKKG-GIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARIVSELGKEFNV 451 +V +TPG T+ Q ++L +V L DCPG+V N + I++L D +GP + R P + ++Y + + + L A RG + +G G D A+R IL D+ GK+ Y PP + P E K+ V Sbjct: 363 SVSSTPGKTKHFQTIKLSDSVMLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPAGLVAERIPKYYIEAIYGIHIQTKSRDEGGNGDIPTAQELLVAYARARGYMTQGYGSADEPRASRYILKDYVNGKLLYVNPPPHLEDDTPYTREECEEFNKDLYV 525 The following BLAST results are available for this feature:
BLAST of CX289183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289183 ID=CX289183; Name=CX289183; organism=Citrus clementina; type=EST; length=526bpback to top |