CX289189

Overview
NameCX289189
Unique NameCX289189
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.632e-66
Identity = 126/158 (79.75%), Postives = 135/158 (85.44%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHF 474
            VIKPVIPEKYLDEKTIFHLNPSGRF  GGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVR+AAKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE+FDFRPGM++I+LDL RGGNGRF + +    F
Sbjct:  216 VIKPVIPEKYLDEKTIFHLNPSGRFRHGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.020e-65
Identity = 126/174 (72.41%), Postives = 137/174 (78.74%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD-FTWEVVKPL 519
            VIK V+PEKYLD  TIFHLNPSGRFVIGGP GDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQ AKSIVA GLARR + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE FDFR GM+  +LDLKRGGN R+  TAAYGHFGRDD D FTWE V PL
Sbjct:  213 VIKKVVPEKYLDADTIFHLNPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.693e-55
Identity = 111/174 (63.79%), Postives = 128/174 (73.56%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 522
            VIK V+P +YLD+ TI+HLNPSGRFVIGGP GD+GLTGRKIIID+Y             KD TKVDRSGAY  R  AKS+VA GLA RC+VQVSY+IGV +PLSVFVD+YGTGK  D EIL I+  +FD RPG +  +L L R     F KTA+ GHFGR+DPDFTWE VK LK
Sbjct:  213 VIKAVVPAQYLDDNTIYHLNPSGRFVIGGPMGDSGLTGRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.653e-50
Identity = 96/168 (57.14%), Postives = 126/168 (75.00%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            VIK VIP + +D  TIF++NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS +Y++R  AK+IVA GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K++FD RP  +  +LDL+R     + KTAAYGHFGR+D +FTWE
Sbjct:  218 VIKAVIPPEMIDAHTIFYVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.653e-50
Identity = 103/175 (58.86%), Postives = 124/175 (70.86%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 525
            VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  226 VIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 3.653e-50
Identity = 103/175 (58.86%), Postives = 124/175 (70.86%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 525
            VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  226 VIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.653e-50
Identity = 103/175 (58.86%), Postives = 124/175 (70.86%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 525
            VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  226 VIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.653e-50
Identity = 103/175 (58.86%), Postives = 124/175 (70.86%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 525
            VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  226 VIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.138e-50
Identity = 106/177 (59.89%), Postives = 122/177 (68.93%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGT--GKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 525
            VIKP IP   LD +TIFHLNPSGRFVIGGP G+AGLTG KIIIDTY             KDP+KVDRS AY  R  AKS+VA GLA R +VQVSYAIGV  PLSVFVDSYGT  G   D+++L I K +FD RPG +  +L L+R     + KTA +GHFGR+DPDF WE  K L +
Sbjct:  215 VIKPSIPAHLLDGETIFHLNPSGRFVIGGPQGEAGLTGGKIIIDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNFDLRPGKIINDLQLRR---PIYEKTAYHGHFGRNDPDFLWEAPKKLNF 388          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.063e-49
Identity = 102/175 (58.29%), Postives = 123/175 (70.29%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 525
            +IK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK +FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  226 LIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKNNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
The following BLAST results are available for this feature:
BLAST of CX289189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_PEA1.632e-6679.75S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_OSTTA4.020e-6572.41S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK_DICDI1.693e-5563.79S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW3.653e-5057.14S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK2_PONAB3.653e-5058.86S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE3.653e-5058.86S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA3.653e-5058.86S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN3.653e-5058.86S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_ACACA8.138e-5059.89S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK2_RAT1.063e-4958.29S-adenosylmethionine synthetase isoform type-2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionC02010B12SK IF1 Citrus clementina cDNA clone C02010B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289189 ID=CX289189; Name=CX289189; organism=Citrus clementina; type=EST; length=570bp
GTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTT
CCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATG
CTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGGGA
GCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAG
GAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACG
GGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCT
GAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGA
CAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAA
TGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTG
AAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTG
GGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAG
TTGAAAAGTGAAAACTATCC
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