CX289189

Overview
NameCX289189
Unique NameCX289189
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.175e-48
Identity = 97/168 (57.74%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            VIKP+IPE  LD+ T  ++NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA GLA++C VQ+SYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +LDL+R     + K AAYGHFGR+D D  WE
Sbjct:  217 VIKPIIPEGMLDKNTKIYINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGREDLDLPWE 381          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.419e-48
Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            +IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  208 IIKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.419e-48
Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            +IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  208 IIKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.419e-48
Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            +IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  208 IIKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.419e-48
Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            +IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  208 IIKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.466e-48
Identity = 93/168 (55.36%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            VIK V+P   LDE T F++NP+GRFV+GGP GD GLTGRKII+DTY             KDP+KVDRS +Y+ R  AK++VA  LAR+C VQ++YAIGV EP+S+ V+++GTG +P  EI +IV+E FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  211 VIKKVVPADMLDENTKFYVNPTGRFVVGGPQGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSASYMARYVAKNVVAAKLARKCEVQIAYAIGVAEPVSIMVNTFGTGVLPSNEIARIVREEFDMRPAAIIETLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.466e-48
Identity = 97/168 (57.74%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            VIKPVIPE  LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA+GLA++C VQVSYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +L+L+R     + + AAYGHFGR+D D  WE
Sbjct:  217 VIKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVFDLRPAAIIRDLNLRR---PIYKQVAAYGHFGREDLDLPWE 381          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.466e-48
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPL 519
            VIK V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EPLS+ + +YGT    ++E+L++V ++FD RPG++  +LDLK+     + KTA YGHFGR   +F WEV K L
Sbjct:  227 VIKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSNKTERELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 394          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_TERTT (S-adenosylmethionine synthetase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.832e-48
Identity = 95/169 (56.21%), Postives = 121/169 (71.60%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEV 507
            +IKPV+P ++L   T +H+NP+G+F+IGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI D +I+++VKE FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE+
Sbjct:  208 IIKPVLPAEWLHSNTKYHINPTGQFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVNTFGTGKIDDGKIVELVKEHFDLRPRGLIEMLDLMR---PIYRKTAAYGHFGRELPEFTWEI 373          
BLAST of CX289189 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.617e-48
Identity = 93/168 (55.36%), Postives = 122/168 (72.62%), Query Frame = 1
Query:    1 VIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 504
            VI PVIP + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA+G+AR+C VQ++YAIGV +P+SV VD++GT  IP+++I ++V + FD RP  +   L+L+R     + KTAAYGHFGRDD +F+WE
Sbjct:  218 VIIPVIPRELLDEGTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
The following BLAST results are available for this feature:
BLAST of CX289189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CALS81.175e-4857.74S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_COXBU3.419e-4855.95S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR3.419e-4855.95S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB23.419e-4855.95S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB13.419e-4855.95S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_PELCD4.466e-4855.36S-adenosylmethionine synthetase OS=Pelobacter carb... [more]
METK_ANATD4.466e-4857.74S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK1_MOUSE4.466e-4856.65S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_TERTT5.832e-4856.21S-adenosylmethionine synthetase OS=Teredinibacter ... [more]
METK_CLOCE7.617e-4855.36S-adenosylmethionine synthetase OS=Clostridium cel... [more]

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Properties
Property NameValue
Genbank descriptionC02010B12SK IF1 Citrus clementina cDNA clone C02010B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289189 ID=CX289189; Name=CX289189; organism=Citrus clementina; type=EST; length=570bp
GTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTT
CCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATG
CTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGGGA
GCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAG
GAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACG
GGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCT
GAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGA
CAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAA
TGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTG
AAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTG
GGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAG
TTGAAAAGTGAAAACTATCC
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