CX289192
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_HALLT (Nucleoside diphosphate kinase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=ndk PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.372e-33 Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 3 Query: 162 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E+TF+M+KPDGVQRGL+GEI+ RFE++G L G K M +D A +HY + KPFF L+++ITS PV AM+WEG + R+++G T+PA+SAPGTIRGD + G+N+IH S Sbjct: 6 ERTFVMVKPDGVQRGLIGEIVSRFEERGLKLVGGKFMQIDEDLAHQHYGEHEGKPFFDGLVDFITSAPVFAMVWEGADATRQVRSMVGETDPAESAPGTIRGDFGLDLGQNVIHAS 121
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_EXIS2 (Nucleoside diphosphate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=ndk PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33 Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 MEQTF+M+KPDGV+RGL+GEII R E+KGF ++ +K+M V A+ HY + + KPFFG L+ ++TSGPVVA+ EGE VV R +IG T P ++ PGTIRGD A N+IHGS Sbjct: 1 MEQTFLMVKPDGVERGLIGEIIARIERKGFVIREMKMMQVTEELAQAHYAEHAEKPFFGELVTFLTSGPVVALRVEGEDVVTVSRMMIGKTKPTEALPGTIRGDFANTMSENVIHGS 117
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_UNCMA (Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon RC-I GN=ndk PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33 Identity = 64/118 (54.24%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 156 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E E+TF+M+KPDGVQRGLVGEII RFE++G + G+K++ V A++HY + ++KPFF L+ +I SGP VAM+ EG+ V R+++G T P +SAPGTIRGD A+ GRN+IH S Sbjct: 3 ERERTFVMVKPDGVQRGLVGEIISRFERRGLKIVGMKMLEVSEELAKQHYAEHAAKPFFPGLVSFIRSGPTVAMVIEGKDAVSMVRSMLGKTKPIESAPGTIRGDFALDMGRNVIHAS 120
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK3_MOUSE (Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 3.056e-33 Identity = 63/116 (54.31%), Postives = 84/116 (72.41%), Query Frame = 3 Query: 162 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E+TF+ +KPDGVQR LVGEI+ RFE+KGF L LKL+ +HY +L KPF+ L++Y++SGPVVAM+W+G VV R +IGAT+P + PGTIRGD + G+N+IHGS Sbjct: 22 ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELREKPFYSRLVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGKNVIHGS 137
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_RUBXD (Nucleoside diphosphate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=ndk PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.991e-33 Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 MEQT ++IK DGV+R L+GEII R E KG +++ LK+M V R AE+HY + KPFFG L+E+ITS PVVAM EGEG + R ++GAT+PA++APGTIRGDLA+ N++HGS Sbjct: 1 MEQTLVLIKGDGVRRRLIGEIIRRLENKGLAIRDLKMMRVSRELAEEHYAEHREKPFFGELVEFITSAPVVAMRVEGEGAIGVVRNLMGATDPAKAAPGTIRGDLALSMPDNLVHGS 117
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_FRASC (Nucleoside diphosphate kinase OS=Frankia sp. (strain CcI3) GN=ndk PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.213e-33 Identity = 62/117 (52.99%), Postives = 92/117 (78.63%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 +E+T I++KPDGV RGLVGE++ R E+KG +L L+L T++R AE HY + +SKPFFG L+++ITSGP+VA++ EG V+ R +IGAT+P ++APG++RGD A+ G+N++HGS Sbjct: 3 VERTLILVKPDGVSRGLVGEVVGRLERKGLTLVALELRTLERSVAETHYGEHASKPFFGELVDFITSGPLVALVAEGPRAVEASRGLIGATDPVKAAPGSLRGDYALEIGQNLVHGS 119
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_LISW6 (Nucleoside diphosphate kinase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ndk PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.891e-33 Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 MEQT++M+KPDGV+RGL+GEI+ + EKKG L KL+ +DR AE+HY + KPFF LI +ITSGPV AM+ EG+ V+K R ++G TNP ++ GTIR + A+ T RN+IHGS Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVAKIEKKGIKLVAGKLIQIDRKLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKIARRMMGKTNPLEADAGTIRAEYAVHTNRNVIHGS 117
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_HALWD (Nucleoside diphosphate kinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=ndk PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.161e-32 Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 3 Query: 162 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E+TF+M+KPDGVQRGL+GEII RFE +G +L G K +D A HY + KPFF L+ +IT+GPV AM+WEG + R+++G T+PA+SAPGTIRGD + GRN+IH S Sbjct: 9 ERTFVMVKPDGVQRGLIGEIISRFEDRGLTLVGGKFTRLDTEVARDHYGEHKDKPFFDDLVSFITAGPVFAMVWEGADATRQVRSMVGETDPAESAPGTIRGDYGLDLGRNVIHAS 124
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_FRASN (Nucleoside diphosphate kinase OS=Frankia sp. (strain EAN1pec) GN=ndk PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.161e-32 Identity = 63/116 (54.31%), Postives = 90/116 (77.59%), Query Frame = 3 Query: 162 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E+T I++KPDGV RGLVGE++ R E+KG + L+L T++R AE HY + +SKPFFG L+E+ITSGP+VA++ EG V+ R +IGAT+P ++APG++RGD A+ G+N+IHGS Sbjct: 4 ERTLILVKPDGVSRGLVGEVVGRIERKGLKIVALELRTLERSVAETHYGEHASKPFFGELVEFITSGPLVALVAEGPRAVEALRGLIGATDPVKAAPGSLRGDFALEIGQNLIHGS 119
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_METMA (Nucleoside diphosphate kinase OS=Methanosarcina mazei GN=ndk PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.517e-32 Identity = 63/117 (53.85%), Postives = 87/117 (74.36%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 MEQT++M+KPDGVQRGLVGE+I R EK+G + L++ + A++HY + +++PFF SLIE+ITSGP V+M+ G+ +K R I GATNP +APGTIRGD A+ GRN++H S Sbjct: 1 MEQTYVMVKPDGVQRGLVGEVISRIEKRGLKIVALRMNVIAEATAKEHYGEHAARPFFPSLIEFITSGPSVSMVVAGKDAIKVMRAINGATNPVDAAPGTIRGDFALDVGRNVVHAS 117 The following BLAST results are available for this feature:
BLAST of CX289192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289192 ID=CX289192; Name=CX289192; organism=Citrus clementina; type=EST; length=510bpback to top |