CX289192
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.084e-38 Identity = 74/116 (63.79%), Postives = 92/116 (79.31%), Query Frame = 3 Query: 162 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E+TFI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGS Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGS 118
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDKA_RAT (Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.084e-38 Identity = 76/116 (65.52%), Postives = 88/116 (75.86%), Query Frame = 3 Query: 162 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E+TFI IKPDGVQRGLVGEII RFE+KGF L GLK + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGS Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS 120
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.850e-38 Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 162 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P +S PGTIRGDLA+ GRN+IHGS Sbjct: 3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGS 118
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_BREBN (Nucleoside diphosphate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ndk PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.850e-38 Identity = 71/117 (60.68%), Postives = 89/117 (76.07%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 ME+TF+M+KPDGVQR L+GEI+ RFEKKG+ L G KLMTV R AE+HY + +PFFG L+++ITSGPV AM+W+G V+ T R ++G TNP +A GTIRGD A G NIIHGS Sbjct: 1 MEKTFLMVKPDGVQRNLIGEIVSRFEKKGYQLVGAKLMTVSRELAEEHYAEHKERPFFGELVDFITSGPVFAMVWQGNNVITTARAMMGKTNPVDAASGTIRGDFATSVGMNIIHGS 117
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_BACSU (Nucleoside diphosphate kinase OS=Bacillus subtilis GN=ndk PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 1.850e-38 Identity = 72/117 (61.54%), Postives = 89/117 (76.07%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 ME+TFIM+KPDGVQR L+G+I+ RFE+KG L G KLM V AEKHY + KPFFG L+E+ITSGPV AM+WEGE V++ R +IG TNP ++ PGTIRGD + G+NIIHGS Sbjct: 2 MEKTFIMVKPDGVQRQLIGDILSRFERKGLQLAGAKLMRVTEQMAEKHYAEHQGKPFFGELVEFITSGPVFAMVWEGENVIEVTRQLIGKTNPKEALPGTIRGDYGMFVGKNIIHGS 118
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.155e-38 Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 +E+TF+ IKPDGVQRGL+ EI+ RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGS Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGS 119
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDKB_PONAB (Nucleoside diphosphate kinase B OS=Pongo abelii GN=NME2 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.155e-38 Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 150 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 + +E+TFI IKPDGVQRGLVGEII RFE+KGF L +K + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGS Sbjct: 1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYTDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRLMLGETNPADSKPGTIRGDFCIQVGRNIIHGS 120
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.121e-38 Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 159 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 +E+TF+ IKPDGVQRGL+ EI+ RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPV+AM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGS Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGS 119
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDKB_RAT (Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.121e-38 Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 150 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 + +E+TFI IKPDGVQRGLVGEII RFE+KGF L +K + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGS Sbjct: 1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS 120
BLAST of CX289192 vs. ExPASy Swiss-Prot
Match: NDKB_MOUSE (Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.121e-38 Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 150 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGS 509 + +E+TFI IKPDGVQRGLVGEII RFE+KGF L +K + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGS Sbjct: 1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS 120 The following BLAST results are available for this feature:
BLAST of CX289192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289192 ID=CX289192; Name=CX289192; organism=Citrus clementina; type=EST; length=510bpback to top |