CX289194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12 Identity = 35/121 (28.93%), Postives = 61/121 (50.41%), Query Frame = 2 Query: 194 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG 556 +GH VW QFS G Y S +DR A +W D + + +GH V+C + + + T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++G Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 699
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 38/122 (31.15%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 197 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNG-GVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGG 559 GH +++ L +S +G+++ S S D+ A IW+++ TL ++ G + V+ V+ S D + + ++ VR WD +G L YE + S + PD K + SG+ DKS+ +W+L G Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSG 488
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TUP12_SCHPO (Transcriptional repressor tup12 OS=Schizosaccharomyces pombe GN=tup12 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 2 Query: 161 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNC---LHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 553 D R ++L GH E++ L FS +GK L S S DR+ +W+V+ + H G V+ V +S D Q + +++ +R W SSG LH +E++ + S + PD K++ SG+ D +I +WEL Sbjct: 362 DIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG----VTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEES---VYSVAFSPDGKYLVSGSLDNTIKLWEL 487
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: CIAO1_IXOSC (Probable cytosolic iron-sulfur protein assembly protein OS=Ixodes scapularis GN=ISCW023049 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 2 Query: 182 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAV---RRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELEC 574 L L+GH D VW + ++ +G LAS D+S +W ++ V L GHQ+ V VSWS+ + L + + RR D + +C E + +CGW P +++ + + DK++ +WE+G +E EC Sbjct: 6 LSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCA-TLEGHENEVKACGWSPSGRFLATCSRDKTVWIWEVGEDEEFEC 139
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: CIAO1_CHLRE (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_130093 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 2 Query: 194 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLK-HKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG---NCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELEC 574 Q HT + + +S G+ LA++S D + +WE L+ GV + +L GH+ V CV+W+ D + + TCG + +V W+ G C+ V + + + WHP + + S D +I +W G E C Sbjct: 62 QCHTRTIRSVAWSPTGRALATASFDATVAVWE--LSSGVWEQVAELEGHENEVKCVAWNPDGRLIATCGRDRSVWIWESMPGREFECVDVKQGHSQDVKAVTWHPSGELLVSAGYDDTIKLWTYDGDEWGC 190
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 32/131 (24.43%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 161 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 553 D P++ ++ L GH + + + F G+++AS S D + +W+V G + + GH V+ + +S D + L+T + ++ WD++ G ++ G+ +HP+ + SG++D+++ W+L Sbjct: 87 DLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCI---YTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDL 214
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11 Identity = 38/129 (29.46%), Postives = 65/129 (50.39%), Query Frame = 2 Query: 161 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 547 D + + L GH DE+ F + GK +A++S D +A ++ +T KL GH+ +S +S++ +LLT ++ R WDV +G CL V E + SC ++ + +G+ D S +W Sbjct: 289 DATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCIT---KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TBL1Y_HUMAN (F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens GN=TBL1Y PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11 Identity = 40/131 (30.53%), Postives = 63/131 (48.09%), Query Frame = 2 Query: 182 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS---------SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 547 ++ QGHT+EV +++ +G LAS S+D + IW + + V H L H K + + WS + L + + VR WDV G C H K + S + PD K++ SG+ DK + +W Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV---HDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIW 479
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TBL1X_HUMAN (F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens GN=TBL1X PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11 Identity = 39/133 (29.32%), Postives = 64/133 (48.12%), Query Frame = 2 Query: 176 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS---------SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 547 R ++ QGHT+EV +++ +G LAS S+D + IW + + H L H K + + WS + + L + + VR WD+ G C H K + S + PD K++ SG+ DK + +W Sbjct: 403 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCI---HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 532
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: EBI_DROME (F-box-like/WD repeat-containing protein ebi OS=Drosophila melanogaster GN=ebi PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11 Identity = 48/180 (26.67%), Postives = 83/180 (46.11%), Query Frame = 2 Query: 104 FHNSSDRDMSLYTDH---QCGRDQI-------PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS---------SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKG 583 FH++ D+ T+ C DQ + ++ +GHT+EV +++ G+ LAS S+D + IW ++ + H L H K + + WS + + L + + VR WDV G+C+H K + S + PD K + SG+ DK + +W G+ + +KG Sbjct: 491 FHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRD---RCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKG 667 The following BLAST results are available for this feature:
BLAST of CX289194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289194 ID=CX289194; Name=CX289194; organism=Citrus clementina; type=EST; length=630bpback to top |