CX289194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: APAF_RAT (Apoptotic protease-activating factor 1 OS=Rattus norvegicus GN=Apaf1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11 Identity = 35/128 (27.34%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 188 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGW--HPDRKWIFSGANDKSICMWELGGKE 565 +++ HTD V+ FS +G+ +AS D++ +++ + + + H+ V C ++SSDD + TC V++ V+ WD +G +H YE+ + C + + + +G+ND + +W+L KE Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL---DIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKE 734
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 37/121 (30.58%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 185 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 547 +I H + ++FS +G+Y+ S S D S IW +D + L GH+ ++ SWSSD + +++C ++ V+ +DVSSG C+ + + C ++P I SG+ D++I +W Sbjct: 101 EIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDF----VYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIW 217
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TAF5_ENCCU (Transcription initiation factor TFIID subunit 5 OS=Encephalitozoon cuniculi GN=TAF5 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 42/123 (34.15%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 95 ACMFHNSSDRDMSLYTDHQCGRDQIPSRTL-QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVS--SGNCLHVY 454 A FH +S + +DH+ I + ++ +I GHTD V + SH GK+LAS S DR+ ++W++ + L K GH+ V VS+ L +CG + +VR WD + G CL Y Sbjct: 411 AVKFHPNSSYLFTGSSDHRVRMHDISTASVVRIFCGHTDTVTCMDVSHCGKFLASGSKDRTVLLWDIQSS---KLLGKYVGHENTVFSVSFCFYGSVLASCGADNSVRLWDRTDHKGGCLGTY 530
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: PFS2_ASHGO (Polyadenylation factor subunit 2 OS=Ashbya gossypii GN=PSF2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 37/121 (30.58%), Postives = 59/121 (48.76%), Query Frame = 2 Query: 188 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 550 I+Q H V +Q+SH G +L S D + IW+ + N L H + + +S+S DQ+ +TC + ++ W+ S+G V + SC WHP I SG+ D I +W+ Sbjct: 116 IMQAHDSAVTVMQYSHAGDWLISGDADGTIKIWQPNFNMVKVLDR---AHTECMRDISFSYSDQKFVTCSDDNVLKIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNLIKLWD 233
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: GBLP_SCHPO (Guanine nucleotide-binding protein subunit beta-like protein OS=Schizosaccharomyces pombe GN=rkp1 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 191 LQGHTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGG 559 L+GH+ V L + N L S S D+S I+W + D+N GV + +L+GH VS + S D L+ ++ +R WD+ G C H + ++S PD + + SG+ DK+I +W + G Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVA-QRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIG 136
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TBL1X_MACFA (F-box-like/WD repeat-containing protein TBL1X OS=Macaca fascicularis GN=TBL1X PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 38/133 (28.57%), Postives = 64/133 (48.12%), Query Frame = 2 Query: 176 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS---------SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 547 R ++ QGHT+EV +++ +G LAS S+D + IW + + H L H K + + WS + + L + + VR WD+ G C H K + S + PD +++ SG+ DK + +W Sbjct: 395 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCI---HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 524
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 39/129 (30.23%), Postives = 65/129 (50.39%), Query Frame = 2 Query: 161 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 547 D + + + L GH DE+ F + GK +A++S D +A I+ VT KL GH+ +S +S++ +LLT ++ R WD +G CL V E + SC ++ I +G+ D + +W Sbjct: 289 DAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVT---KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 36/127 (28.35%), Postives = 60/127 (47.24%), Query Frame = 2 Query: 188 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKEL 568 + QGH VW L S Y AS S+DR+A +W D + + +GH V CV + + L T ++ VR W GN + ++ ++S + P+ K++ S D+ + +W+L L Sbjct: 379 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRI---YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: PFS2_KLULA (Polyadenylation factor subunit 2 OS=Kluyveromyces lactis GN=PFS2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 36/121 (29.75%), Postives = 58/121 (47.93%), Query Frame = 2 Query: 188 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 550 I+Q H V + +SH G ++ S S D IW+ + N +K H + V +S+S DQ+ ++C + ++ W+ S+G V + SC WHP I SG+ D I W+ Sbjct: 118 IMQAHDSAVTVMTYSHTGDWMVSGSADGELKIWQPNFN---MVKVMDQAHMECVREISFSPTDQKFVSCSDDNVLKIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNLIKFWD 235
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 41/126 (32.54%), Postives = 61/126 (48.41%), Query Frame = 2 Query: 182 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGG 559 L+ GHT ++ + FS NGK A++ D++ IW++D N L L GHQ V VS+S D + L + + VR W SG L V + + PD + + S D I +W+L G Sbjct: 594 LREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGN----LLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDG 715 The following BLAST results are available for this feature:
BLAST of CX289194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289194 ID=CX289194; Name=CX289194; organism=Citrus clementina; type=EST; length=630bpback to top |