CX289194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 42/144 (29.17%), Postives = 71/144 (49.31%), Query Frame = 2 Query: 200 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQ-RTLKISDLEVTSD 625 H EV FS +G+ L ++S+D +W L +L+GH+ PV +S D + + + + ++R WDV+ CLHV + + + + PD K + SG DK +WE+ G+ + G +++ SD TSD Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSG---RLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSD 165
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: PKWA_THECU (Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 40/127 (31.50%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 188 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS-SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKE 565 +L+GHTD V+ + FS +G +AS S D + +W+V T K + + VS + S D +L G + V WDV+SG LH +E + + + PD + SG++D++I +W++ +E Sbjct: 580 VLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDV-----ATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQE 701
BLAST of CX289194 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 35/127 (27.56%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 173 SRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 553 ++ L+ L GH + L F G+YLAS S D + +W+V G V + GH + V C+++S D + L + + V+ WD+ +G + + + +HP+ + SG+ D+++ +W+L Sbjct: 95 AKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCV---FRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218 The following BLAST results are available for this feature:
BLAST of CX289194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289194 ID=CX289194; Name=CX289194; organism=Citrus clementina; type=EST; length=630bpback to top |