CX289199

Overview
NameCX289199
Unique NameCX289199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.480e-46
Identity = 95/177 (53.67%), Postives = 122/177 (68.93%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGK---QLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520
            QIVS+ +VGD V A+A + EL  YG++VGLTNYAAAYCTGLLLARR+L  L++D ++ G VEA GE Y VE  D  RRPF+ALLDVG+   TTGNRVF            +PHS+KRF G+S D +     DA+ HR  I+G HVA YM  L E++PEKY+  F+ Y+K G+D++ L
Sbjct:   63 QIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKRQFSAYLKLGLDSESL 239          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.480e-46
Identity = 95/177 (53.67%), Postives = 122/177 (68.93%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQ---LDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520
            QIVS+ +VGD V A+A + EL  YG++VGLTNYAAAYCTGLLLARR+L  L++D ++ G VEA GE Y VE  D  RRPF+ALLDVG+   TTGNRVF            +PHS+KRF G+S D +     DA+ HR  I+G HVA YM  L E++PEKY+  F+ Y+K G+D++ L
Sbjct:   63 QIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEDDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGTYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKKQFSAYLKLGLDSESL 239          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 7.480e-46
Identity = 91/172 (52.91%), Postives = 116/172 (67.44%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDAD 514
            QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+VE  D +   F   LD GL +TTTGN+VF            IPHS KRF G+  + K+ +AEVHRK+I G +VA YM  LME++ + Y+  F++YIK  +  D
Sbjct:   63 QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD 234          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 2.176e-45
Identity = 90/172 (52.33%), Postives = 116/172 (67.44%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDAD 514
            QI  A I GD ++ AAYAH+LP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+VE  D +   F   LD GL +TTTGN+VF            IPHS KRF G+  + K+ +AEVHRK+I G +VA YM  LME++ + Y+  F++YIK  +  D
Sbjct:   63 QIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD 234          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 2.842e-45
Identity = 90/172 (52.33%), Postives = 115/172 (66.86%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDAD 514
            QI  A I GD V+ AAYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L    +D+ YEG  E  G+++ VE  D +   FRA LDVGL +TTTG +VF            IPHS KRF G+  +     AEVHR +I+GGHV+ YM  L E++ E ++  F++YIK G+ AD
Sbjct:   63 QIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTAD 234          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 2.842e-45
Identity = 90/172 (52.33%), Postives = 115/172 (66.86%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDAD 514
            QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE  G++Y+VE  D +   F   LD GL +TTTGN+VF            IPHS KRF G+  + K+ +AEVHRK+I G +VA YM  LME++ + Y+  F++YIK  +  D
Sbjct:   63 QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPD 234          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 2.842e-45
Identity = 90/172 (52.33%), Postives = 115/172 (66.86%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDAD 514
            QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+VE  D +   F   LD GL +TTTGN+VF            IPHS KRF G+  + K+  AEVHRK+I G +VA YM  L+E++ + Y+  F++YIK  +  D
Sbjct:   63 QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLIEEDEDAYKKQFSQYIKNNVTPD 234          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_BOMMO (60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 6.332e-45
Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520
            Q+  + I GD ++ AAY+HELPRYG++VGLTNYAAAY TGLLLARR+L+ L +D  Y G  + TG++Y+VEP D     FR  LDVGL +TTTG RVF            +PHS KRF G+  + K+ +AEVHR +I+G HVA YM +L +D+ + ++  F++YIK G+ AD +
Sbjct:   63 QVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLGLDTLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAI 236          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_MOUSE (60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 8.270e-45
Identity = 90/172 (52.33%), Postives = 114/172 (66.28%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDAD 514
            QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE  G +Y+VE  D +   F   LD GL +TTTGN+VF            IPHS KRF G+  + K+ +AEVHRK+I G +VA YM  LME++ + Y+  F++YIK  +  D
Sbjct:   63 QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPD 234          
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.941e-42
Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 2
Query:    2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSK--DG--KQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520
            Q++ A + GD ++ +A + EL RYG++VGLTNY+AAY TGLLLARR+LK   + DE++G  + +GE+Y +E  ++ RRPF+ +LDVG++ TT GNRVF            IPHS+KRF GF+K  DG     + EVHR  IYG HVA YM TL E++PE+YQ+ F+ YI+  ID D +
Sbjct:   63 QVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSI 240          
The following BLAST results are available for this feature:
BLAST of CX289199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
RL5_THEPA7.480e-4653.6760S ribosomal protein L5 OS=Theileria parva GN=RPL... [more]
RL5_THEAN7.480e-4653.6760S ribosomal protein L5 OS=Theileria annulata GN=... [more]
RL5_HUMAN7.480e-4652.9160S ribosomal protein L5 OS=Homo sapiens GN=RPL5 P... [more]
RL5_MACFA2.176e-4552.3360S ribosomal protein L5 OS=Macaca fascicularis GN... [more]
RL5_STYCL2.842e-4552.3360S ribosomal protein L5 OS=Styela clava GN=RPL5 P... [more]
RL5_RAT2.842e-4552.3360S ribosomal protein L5 OS=Rattus norvegicus GN=R... [more]
RL5_BOVIN2.842e-4552.3360S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=... [more]
RL5_BOMMO6.332e-4550.0060S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE... [more]
RL5_MOUSE8.270e-4552.3360S ribosomal protein L5 OS=Mus musculus GN=Rpl5 P... [more]
RL5_EIMTE2.941e-4249.4460S ribosomal protein L5 OS=Eimeria tenella GN=RPL... [more]

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Properties
Property NameValue
Genbank descriptionC02010C11SK IF1 Citrus clementina cDNA clone C02010C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289199 ID=CX289199; Name=CX289199; organism=Citrus clementina; type=EST; length=520bp
ACAGATAGTGTCAGCCAACATTGTTGGTGATTCTGTCCTTGCTGCTGCTT
ATGCCCATGAGCTTCCTCGTTATGGACTTGAAGTAGGTCTTACAAACTAT
GCTGCAGCTTATTGCACTGGGCTTCTTTTGGCTCGTCGTGTCTTGAAGAT
GCTTGAAATGGATGATGAGTATGAGGGCAATGTTGAGGCTACTGGAGAGG
ATTACTCTGTCGAACCAGCTGATACAAGGAGGCCATTCCGTGCTCTCCTT
GATGTTGGGCTCATCAAAACAACAACTGGAAACCGTGTCTTTGGTGCTCT
GAAGGGAGCATTAGATGGTGGATTGGACATTCCTCATAGTGACAAGAGGT
TTGCTGGTTTTTCAAAGGACGGCAAGCAGCTGGATGCTGAGGTTCACCGC
AAGTATATCTATGGTGGACATGTTGCTGCTTACATGAGTACATTGATGGA
AGATGAGCCAGAGAAGTATCAATCTCACTTCACTGAGTACATCAAGAAAG
GAATTGATGCTGATGGCTTG
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