CX289199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 6.553e-42 Identity = 83/169 (49.11%), Postives = 119/169 (70.41%), Query Frame = 2 Query: 2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGI 505 Q+V + IVGD VL AAYAHELPR+G++VGLTNYA+ Y TGLLLARR+L L++ D Y+G + G+ + V+P D + RPF+A LDVGL +T+TG +VF +PH + RFAG++ + K+L+AE R YI+G HVA+YM+ L ++ + Y+ F++YIK G+ Sbjct: 63 QVVYSKIVGDFVLCAAYAHELPRFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYKGAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKKLNAETLRGYIFGKHVASYMTLLQTEDEDAYKKIFSQYIKNGV 231
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 3.252e-41 Identity = 85/174 (48.85%), Postives = 113/174 (64.94%), Query Frame = 2 Query: 2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520 QI+S+ I GD VLAAAY+HELPRYG+ GLTN+AAAY TGLL+ARR L+ L +D+ Y+G E GE E D RPF+ LD+GL +TTTG RVF +PHS+ RF G+ + +++D E+ R YI+GGHV+ YM L +D+ E++ F Y+ IDAD L Sbjct: 63 QIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSL 236
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_OIKDI (60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 6.133e-40 Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 2 Query: 2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED-YSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520 QI A + GD ++ +AYAHELPRYG+ VGLTNY+AAY TGLL+ RRVL+ +D YEG +E G++ Y A + FR LD GL +T+TG R+F IPHS KRF GF+ DGK L+AE H+ +I+GGHV YM L E+ E Y+ F+ +IK GI+++ + Sbjct: 73 QIAYARLQGDVIVTSAYAHELPRYGVSVGLTNYSAAYATGLLIGRRVLQKFGLDSMYEGQIEVDGDEFYEEADAAEKASFRCYLDTGLARTSTGARIFGVLKGCADAGIDIPHSPKRFPGFA-DGK-LNAEAHKDHIFGGHVGDYMEKLEEENEEAYKRQFSRFIKNGINSENI 244
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 6.133e-40 Identity = 87/174 (50.00%), Postives = 112/174 (64.37%), Query Frame = 2 Query: 2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520 QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE E D RPF+ LDVGL +T+TG+RVF IPHS RF GF + ++LD E RKYIYGGHVA YM L++D+ E+YQ F+ I GI++D L Sbjct: 63 QIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQL 236
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 6.133e-40 Identity = 87/174 (50.00%), Postives = 112/174 (64.37%), Query Frame = 2 Query: 2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520 QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE E D RPF+ LDVGL +T+TG+RVF IPHS RF GF + ++LD E RKYIYGGHVA YM L++D+ E+YQ F+ I GI++D L Sbjct: 63 QIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQL 236
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.598e-18 Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 2 Query: 362 SKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520 SKD KQLDAEVHRKYIYGGHVAAYM+ LMEDEPEKYQSHF+ YIK + D + Sbjct: 2 SKDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNI 54
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL5_PIG (60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16 Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 2 Query: 2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVE 187 QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L M Y G VE Sbjct: 63 QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQVE 124
BLAST of CX289199 vs. ExPASy Swiss-Prot
Match: RL18_META3 (50S ribosomal protein L18P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.410e-12 Identity = 51/173 (29.48%), Postives = 75/173 (43.35%), Query Frame = 2 Query: 2 QIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGL 520 QIV + VGD ++ +A++ E+ + G + N AAY TGLLL ++ LK EGN E A+LD+GL T G V IPHS++ G + I G HV Y L ++ EKY F++Y+K G++ + L Sbjct: 47 QIVEYDEVGDKIVVSAHSKEIVKLGYKGHCGNVPAAYLTGLLLGKKALK--------EGNEE------------------AILDLGLNSATKGAAVLAILKGAVDAGMDIPHSEEILPGEDR-------------INGSHVKEYAELLKVEDEEKYNKQFSKYLKNGLNPEDL 180 The following BLAST results are available for this feature:
BLAST of CX289199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289199 ID=CX289199; Name=CX289199; organism=Citrus clementina; type=EST; length=520bpback to top |