CX289203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_COCIM (40S ribosomal protein S1 OS=Coccidioides immitis GN=RPS1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28 Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 D Y +KAPS F VR+VGKT+V RT G K A++ LK R+FEVSL DL N++ H++RKI+LR ++VQGKN LTNF GM+FT+DKLRSLVRKW Sbjct: 28 DEYLVKAPSTFAVRDVGKTIVNRTTGLKNANDSLKGRIFEVSLADLQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28 Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYD+KAPS F VR +GKTLVTR+QGTKIAS+ LK RVFEVSL DL N+E +RK +L AE+VQG+NVLTNF GM+ T DKL S+V+KW Sbjct: 29 EWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDEV-TFRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_YARLI (40S ribosomal protein S1 OS=Yarrowia lipolytica GN=RPS1 PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28 Identity = 56/90 (62.22%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWY+IKAPS F R+VGKTLV R+ G ++A++ LK RV EVSL DL +E+H+++K++LR ++VQGKN+LTNF G +FT+DKLRSLVRKW Sbjct: 28 DWYNIKAPSTFENRDVGKTLVNRSTGLRLANDYLKGRVLEVSLADLQGQEDHSFKKVKLRVDEVQGKNLLTNFHGFDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28 Identity = 57/90 (63.33%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM+FTTDK+RS+VRKW Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_PICGU (40S ribosomal protein S1 OS=Pichia guilliermondii GN=RPS1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28 Identity = 56/90 (62.22%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +W+DIKAP+ F R VGKTL+ ++ G K A++GLK RV EV+L DL E+HAYRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW Sbjct: 28 EWFDIKAPTTFENRAVGKTLINKSTGLKNAADGLKGRVIEVNLADLQGSEDHAYRKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28 Identity = 57/90 (63.33%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYDIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF G++FTTDKLRS+VRKW Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNAADFLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDFTTDKLRSMVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28 Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYDIKAPS F+ RNVGKTLV R+ G K AS+ LK RV E L DL E+H++RKI+LR ++VQGKN+LTN GM+FTTDK RS+VRKW Sbjct: 28 EWYDIKAPSTFKNRNVGKTLVNRSAGLKSASDTLKGRVVEACLADLQGSEDHSFRKIKLRVDEVQGKNLLTNIHGMDFTTDKYRSMVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_PICPG (40S ribosomal protein S1 OS=Pichia pastoris (strain GS115) GN=RPS1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28 Identity = 56/90 (62.22%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYDIKAP+ F RNVGKTL+ ++ G K A +GLK RV EVSL DL E+H+++KI+LR ++VQGKN+LTNF G +FT+DK+RSLVRKW Sbjct: 28 EWYDIKAPTTFENRNVGKTLINKSTGLKNAVDGLKGRVVEVSLADLQGSEDHSFKKIKLRVDEVQGKNLLTNFHGFDFTSDKVRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28 Identity = 63/92 (68.48%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E ++RK RL AE VQG+NVL NF GM+ TTDKLR +V+KW Sbjct: 29 DWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 120
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_UNCRE (40S ribosomal protein S1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS1 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27 Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 D Y +KAPS F R+VGKT+V RT G K A++ LK R+FEVSL DL N++ H++RKI+LR ++VQGKN LTNF GM+FT+DKLRSLVRKW Sbjct: 28 DEYLVKAPSTFATRDVGKTIVNRTVGLKNANDSLKGRIFEVSLADLQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKW 117 The following BLAST results are available for this feature:
BLAST of CX289203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289203 ID=CX289203; Name=CX289203; organism=Citrus clementina; type=EST; length=413bpback to top |