CX289203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A1_LEIIN (40S ribosomal protein S3a-1 OS=Leishmania infantum GN=LinJ35.0500 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.119e-21 Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL EE AYRK+R ++VQG+N+LT F M TTDK+ SL+RKW Sbjct: 29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKW 120
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_PLAYO (40S ribosomal protein S3a OS=Plasmodium yoelii yoelii GN=PY02291 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 2.325e-20 Identity = 44/89 (49.44%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRK 405 +WYD+ AP F VR GKTLVT+T G K+A++GLK R++EV+L DL N+E+ A++KI+L + + ++ T+F G++ T DKL SL+RK Sbjct: 28 EWYDLNAPKMFMVRKFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQAHKKIKLICDHIINRDCYTDFCGLSITRDKLCSLIRK 116
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A2_TRYCR (40S ribosomal protein S3a-2 OS=Trypanosoma cruzi GN=Tc00.1047053511001.9 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.728e-19 Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++ AYRK++ ++VQG+N+LT F M T+D++ L+RKW Sbjct: 28 EWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDDAYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKW 119
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A1_TRYCR (40S ribosomal protein S3a-1 OS=Trypanosoma cruzi GN=Tc00.1047053503635.59 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.728e-19 Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++ AYRK++ ++VQG+N+LT F M T+D++ L+RKW Sbjct: 28 EWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDDAYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKW 119
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_TETTH (40S ribosomal protein S3a OS=Tetrahymena thermophila GN=TTHERM_00047480 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.666e-18 Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYD +AP F ++ GKTLVT++ G +IASE +K RV E +L DL N + A+RK++L ++V G+N T+F+G++ T D+L S++RKW Sbjct: 30 EWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLKDNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKW 120
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_GIALA (40S ribosomal protein S3a OS=Giardia lamblia GN=GL50803_16265 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.011e-13 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRK 405 +WY + AP+ F+ R++G+T VT+T G ++A++ + HRV+EV+LGDL E+ + K L+ + V LTNF GM+ T K SL RK Sbjct: 26 EWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRK 116
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_NOSCE (40S ribosomal protein S1 OS=Nosema ceranae (strain BRL01) GN=RPS1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWH 411 +WY++KAP+ F GKT+VT++ + + L R F+++ DL N EEHA RK R +V+GK+ + F GM+ T+DK++ ++RKWH Sbjct: 30 EWYNLKAPAIFPNNVCGKTMVTKSSNKQNLALLLIGRKFDINQADLTGNLEEHA-RKFSFRVNEVRGKDCIGVFDGMHMTSDKVKGIIRKWH 120 The following BLAST results are available for this feature:
BLAST of CX289203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289203 ID=CX289203; Name=CX289203; organism=Citrus clementina; type=EST; length=413bpback to top |