CX289203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_SALSA (40S ribosomal protein S3a OS=Salmo salar GN=rps3a PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 61/90 (67.78%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYD+KAP+ F +RN+GKTLV+RTQGT+IAS+GLK RVFEVSL DL N+E A+RK +L +EDVQGKN LTNF GM+ T DK+ S+V+KW Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVSRTQGTRIASDGLKGRVFEVSLADLQNDEV-AFRKFKLISEDVQGKNCLTNFHGMDLTRDKMCSMVKKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_PENMQ (40S ribosomal protein S1 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=rps1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 59/90 (65.56%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 D Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW Sbjct: 28 DEYSVKAPSTFQIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_OPHHA (40S ribosomal protein S3a OS=Ophiophagus hannah GN=RPS3A PE=2 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN L NF GM+ T DK+ S+V+KW Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_NECH7 (40S ribosomal protein S1 OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=RPS1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 60/90 (66.67%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+RK+RLR ++VQGKN LTNF G++FT+DKLRSLVRKW Sbjct: 28 DWYSIKAPNPFNVRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAFRKVRLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_MAGGR (40S ribosomal protein S1 OS=Magnaporthe grisea GN=RPS1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 59/90 (65.56%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWY IKAP+ F +R+VGKTLV R+ G K A++ LK R+FEVSL DL +E+HA+RKI+LR ++VQGKN LTNF G++FT+DKLRSLVRKW Sbjct: 28 DWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDEDHAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYDIKAPS F RNVGKTLV R+QG K A++ L+ R+ EVSL DL +EE ++RKI+LR +++QG+N LTNF GM+FT+DKLRSLVRKW Sbjct: 28 DWYDIKAPSIFETRNVGKTLVNRSQGLKNANDSLRGRIIEVSLADLNKDEEQSFRKIKLRVDEIQGRNCLTNFHGMDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A2_CLAL4 (40S ribosomal protein S1-B OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1B PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 58/90 (64.44%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +W+DIKAPS F RNVGKTL+ ++ G K A++GLK RVFEV L DL E+H+YRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW Sbjct: 28 EWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A1_CLAL4 (40S ribosomal protein S1-A OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1A PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 58/90 (64.44%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +W+DIKAPS F RNVGKTL+ ++ G K A++GLK RVFEV L DL E+H+YRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW Sbjct: 28 EWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_TRIAD (40S ribosomal protein S3a OS=Trichoplax adhaerens GN=TRIADDRAFT_36460 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.607e-29 Identity = 65/90 (72.22%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYD+KAPS F VRN+GKTLV RT GTKIAS+GLK RVFEVSL DL N E A+RK RL AE+V GK+VLTNF GM+ T+DKL+SLV+KW Sbjct: 28 DWYDVKAPSQFAVRNIGKTLVNRTSGTKIASDGLKGRVFEVSLADLQN-GEIAFRKFRLIAEEVLGKSVLTNFHGMSMTSDKLKSLVKKW 116
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_NEUCR (40S ribosomal protein S1 OS=Neurospora crassa GN=crp-8 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.607e-29 Identity = 58/90 (64.44%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWY IKAP+ F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+H++RK++LR +++QGKN LTNF G++FT+DKLRSLVRKW Sbjct: 28 DWYGIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHSFRKVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKW 117 The following BLAST results are available for this feature:
BLAST of CX289203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289203 ID=CX289203; Name=CX289203; organism=Citrus clementina; type=EST; length=413bpback to top |