CX289203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_CRYNE (40S ribosomal protein S1 OS=Cryptococcus neoformans GN=RPS1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.741e-29 Identity = 60/90 (66.67%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYDIKAPS F RN GKTLV RTQG K A++ LK RV E+SL DL N++E ++RKI+LR EDV GK+ LT+F+GM+FTTDKLRS+VRKW Sbjct: 28 EWYDIKAPSFFENRNAGKTLVNRTQGLKNANDSLKGRVLELSLADLNNDQEQSFRKIKLRVEDVAGKSCLTSFYGMDFTTDKLRSIVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_CULQU (40S ribosomal protein S3a OS=Culex quinquefasciatus GN=CPIJ008584 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.579e-29 Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLN--EEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N + E ++RK +L AEDV G+NVL NF GM+ TTDKLRS+V+KW Sbjct: 29 DWYDVKAPNMFSCRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAERSFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKW 120
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.579e-29 Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR +DVQGKN+LTNF GM+FT DKLRS+VRKW Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDDVQGKNLLTNFHGMDFTADKLRSMVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.579e-29 Identity = 57/90 (63.33%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DW+DIKAPS F RNVGKTL+ R+ G K A++GLK R+ EV+L DL E+H+YR ++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW Sbjct: 28 DWFDIKAPSTFENRNVGKTLINRSTGMKNAADGLKGRIVEVNLADLQGSEDHSYRNVKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_KLULA (40S ribosomal protein S1 OS=Kluyveromyces lactis GN=RPS1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.675e-29 Identity = 59/90 (65.56%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSVGLKNASDSLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_ANOGA (40S ribosomal protein S3a OS=Anopheles gambiae GN=RpS3A PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 4.675e-29 Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYD+KAP+ F+ R VGKTLV RTQGTKIAS+GLK RVFEVSL DL NE E ++RK +L AE V G++VLTNF GM TTDKLRS+V+KW Sbjct: 29 DWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKW 120
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJY (40S ribosomal protein S1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.105e-29 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYDIKAPS F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEH++RK++LR +DVQGK LT F GM+ T+DKLRSLVRKW Sbjct: 28 DWYDIKAPSFFEVKNVGKTLVNRTAGLKNANDALKGRIVEVSLADLQKDEEHSFRKVKLRVDDVQGKACLTTFNGMSMTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_PODAN (40S ribosomal protein S1 OS=Podospora anserina GN=RPS1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.105e-29 Identity = 58/90 (64.44%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW Sbjct: 28 DWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKW 117
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A_AEDAE (40S ribosomal protein S3a OS=Aedes aegypti GN=AAEL005901 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.105e-29 Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLN--EEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 DWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N + E ++RK +L AEDV G+NVL NF GM+ TTDKLRS+V+KW Sbjct: 29 DWYDVKAPNMFSNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAERSFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKW 120
BLAST of CX289203 vs. ExPASy Swiss-Prot
Match: RS3A2_SCHPO (40S ribosomal protein S1-B OS=Schizosaccharomyces pombe GN=rps102 PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 6.105e-29 Identity = 58/90 (64.44%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 139 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKW 408 +WYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEHA+RK++LR ED+QGK+ LT+F G++ T+DKLRSLVRKW Sbjct: 28 EWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHAFRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKW 117 The following BLAST results are available for this feature:
BLAST of CX289203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289203 ID=CX289203; Name=CX289203; organism=Citrus clementina; type=EST; length=413bpback to top |