CX289212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA1_PETMO (Methylthioribose-1-phosphate isomerase 1 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=mtnA1 PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 3.122e-26 Identity = 64/140 (45.71%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAK 425 +E + +D +KAIG +G S L+ + +LTHCN G LA++GYGTAL I H +G + Y ETRP QG+RLT +EL I +MK+G++ AV+VG DRVAANGDT NKIGT LA+ AK Sbjct: 127 SEKIFAEDQEMSKAIGKHGLSLLKPGM-----GLLTHCNAGGLASSGYGTALAPIYLGHEKGYNFKVYADETRPLLQGARLTTYELYKAGIDVTLICDDMASLVMKEGKIDAVLVGCDRVAANGDTANKIGTSGLAVLAK 261
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_YEAST (Methylthioribose-1-phosphate isomerase OS=Saccharomyces cerevisiae GN=MRI1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.955e-26 Identity = 69/160 (43.12%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 15 MLKDDVATNKAIGSYGASFLQNQLKNS----KFSVLTHCNTGSLATAGYGTALGVIRALHSEGV---------LERAYCS--------ETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDG--RVSAVIVGADRVAANGDTTNKIGTYSLALCAK 425 ++ +D+A N +G GA +L + L+ +F+VLT CNTGSLAT+GYGTALGVIR+L + + L+ C ETRP+NQGSRLTA+ELV+D+IP ++ + A VGADR+ NGDT NKIGT LA+ K Sbjct: 143 LIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDSLAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVICK 302
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_SYNSC (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain CC9605) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.955e-26 Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 3 AAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AA + ++D + + +G S L + VL HC+TG++AT G GTALGVI A H+ G+L A+ ETRP QG+ L+A+EL +P LM+ G V AV+VG DRV+ANGD NKIGTY+LAL A+ H Sbjct: 112 AAAALQREDCVLTQRLVDHGVSLLAQGCR-----VLHHCHTGAIATGGVGTALGVIAAAHARGLLRHAWLDETRPRLQGAALSAWELGCLGVPCTVIVDGASGLLMRRGEVDAVMVGCDRVSANGDVANKIGTYNLALVARAH 249
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_PSEPG (Methylthioribose-1-phosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.955e-26 Identity = 62/137 (45.26%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 21 KDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 + D N + G ++ N++ ++LT+ N G+LA+ G+GTALGVIRA + EG++ER Y ETRP+ QGSRLTA+EL ++ IP LMK ++ V+VGAD +AANGD +KIGTY LA+ A H Sbjct: 135 ESDREANLTMSQQGIELIRRHQGNAQ-ALLTYGNAGALASGGFGTALGVIRAGYLEGMVERVYAGETRPWLQGSRLTAWELANEGIPVTLCADSALAHLMKTKGITWVVVGADCIAANGDVASKIGTYQLAVSAMHH 270
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_PSEE4 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas entomophila (strain L48) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.084e-26 Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = 3 Query: 21 KDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 + D N + +G ++ + S+ ++LTH N G+LAT G+GTALGVIRA EG++E+ Y E+RP+ QGSRLTA+EL D +P LMK +S V+VGAD +AANGD KIGTY +A+ A H Sbjct: 135 ESDREANLTMAQFGVEQIRKH-QGSEQALLTHGNAGALATGGFGTALGVIRAATLEGMVEQVYVCESRPWLQGSRLTAWELAADGVPVTVVADAAAGHLMKTKGISWVVVGADCIAANGDVAAKIGTYQIAVAAMHH 270
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: EI2B1_METJA (Putative translation initiation factor eIF-2B subunit 1 OS=Methanocaldococcus jannaschii GN=MJ0454 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.084e-26 Identity = 62/137 (45.26%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 21 KDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 ++D+ T K IG G +++ ++LTHCN G+LAT+ YGTAL VIR G R ETRP QG++LTAFEL ++ IP LM+ G + +IVGADR+ A+G NKIGTYSLA+ AK+H Sbjct: 116 EEDIETCKKIGMIGEKLIEDG-----DTILTHCNAGALATSAYGTALSVIRFAFYNGKKIRVIADETRPRLQGAKLTAFELNYEGIPVKVITDNTAGFLMQKGEIDKIIVGADRILADGTVYNKIGTYSLAVLAKYH 247
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_MOOTA (Methylthioribose-1-phosphate isomerase OS=Moorella thermoacetica (strain ATCC 39073) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.186e-25 Identity = 65/136 (47.79%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 24 DDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 +D A +AIG +GAS L + +VLTHCN G+LATA YGTAL I L + G + + + ETRP QG+RLT +EL IP +M G V AVIVGADR+ ANGD NKIGTY +A+ A+ H Sbjct: 133 EDEAMCRAIGEHGASLLADAE-----AVLTHCNAGTLATARYGTALAPIYTLAARGKVLKVFADETRPLLQGARLTTWELHQAGIPVTLITDNMAATVMARGWVQAVIVGADRITANGDVANKIGTYGVAILAREH 263
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_SYMTH (Methylthioribose-1-phosphate isomerase OS=Symbiobacterium thermophilum GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.550e-25 Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AE + ++D N+ IG Y S L+ + +LTHCN G+LATA YGTAL I G R + ETRP QG+RLTA+EL+ + +MK+G V AV VG DRVAANGDT NKIGT +A+ A+ + Sbjct: 129 AEAIREEDARANRTIGEYALSLLKPGM-----GILTHCNAGALATAAYGTALAPIYLGQERGYNFRVFADETRPLLQGARLTAYELMQAGVDVTLICDNMASAVMKNGWVDAVFVGCDRVAANGDTANKIGTSGVAILARHY 265
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_PSEP1 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.550e-25 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 21 KDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 + D N + G ++ N++ ++LT N G+LA+ G+GTALGVIRA + EG++ER Y ETRP+ QGSRLTA+EL ++ IP LMK ++ V+VGAD +AANGD +KIGTY LA+ A H Sbjct: 135 ESDREANLTMAQQGIELIRRHQGNAQ-ALLTFGNAGALASGGFGTALGVIRAGYLEGMVERVYAGETRPWLQGSRLTAWELANEGIPVTLCADSALAHLMKTKGITWVVVGADCIAANGDVASKIGTYQLAVSAMHH 270
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_THET2 (Methylthioribose-1-phosphate isomerase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.024e-25 Identity = 63/132 (47.73%), Postives = 76/132 (57.58%), Query Frame = 3 Query: 36 TNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 T AI +GA L Q VLTHCNTG LAT GYGTALG I + G + + ETRP+ QG+RLTA+EL +P LM G V AV+VG DR+A NGD NK+GTY+LA+ A H Sbjct: 120 TEAAISRHGAQILWGQ-------VLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHVWVDETRPYLQGARLTAYELQKAGVPATLITDSMAGWLMARGAVDAVVVGVDRMALNGDFANKVGTYALAVLAHHH 244 The following BLAST results are available for this feature:
BLAST of CX289212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289212 ID=CX289212; Name=CX289212; organism=Citrus clementina; type=EST; length=434bpback to top |