CX289225

Overview
NameCX289225
Unique NameCX289225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length389
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 177.178 bits (448), Expect = 2.306e-44
Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GGVMTKLIPRN+ IPTKKS++F+TY D Q  V IQVFEGER+ TKD  LLGKF+LSGIPPAPRG PQIEVTF+VD+NGILNV A +KGTGKS KITITNDKGRLS+            F EED+K
Sbjct:  402 TAGGVMTKLIPRNSTIPTKKSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEK 528          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.306e-44
Identity = 90/129 (69.77%), Postives = 102/129 (79.07%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            TVGG+MT+LI RNTVIPTKKSQ F+TYQD Q  V IQVFEGER+LTKD  LLGKF+LSGIPPA RG P+IEVTF VD NGIL+V+AEDKGTGKS  ITITNDKGRLS+            FA+EDK ++
Sbjct:  427 TVGGIMTQLIKRNTVIPTKKSQTFSTYQDNQPAVLIQVFEGERALTKDNHLLGKFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLR 555          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.306e-44
Identity = 90/129 (69.77%), Postives = 102/129 (79.07%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            TVGG+MT+LI RNTVIPTKKSQ F+TYQD Q  V IQVFEGER+LTKD  LLGKF+LSGIPPA RG P+IEVTF VD NGIL+V+AEDKGTGKS  ITITNDKGRLS+            FA+EDK ++
Sbjct:   51 TVGGIMTQLIKRNTVIPTKKSQTFSTYQDNQPAVLIQVFEGERALTKDNHLLGKFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLR 179          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 6.710e-44
Identity = 87/127 (68.50%), Postives = 100/127 (78.74%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GG+MTKLIPRN+ IPTKKS+ F+TY D Q  V IQVFEGER+ TKD  LLGKF+LSGIPPAPRG PQIEVTF++DANGILNV A +KGTGK++KITITNDKGRLS+            F EED+K
Sbjct:  403 TAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAQTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIEKMVSEAEKFKEEDEK 529          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 6.710e-44
Identity = 87/127 (68.50%), Postives = 100/127 (78.74%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GG+MTKLIPRN+ IPTKKS+ F+TY D Q  V IQVFEGER+ TKD  LLGKF+LSGIPPAPRG PQIEVTF++DANGILNV A +KGTGK++KITITNDKGRLS+            F EED+K
Sbjct:  404 TAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDKMVSEAEKFKEEDEK 530          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 8.763e-44
Identity = 87/129 (67.44%), Postives = 100/129 (77.52%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGVMTKLIPRNT IPT+KSQ+F+T  D Q  V IQV+EGERS+TKD  LLGKF+L+GIPPAPRG PQIEV+FE+DANGIL V A DKGTGK+E ITITNDKGRL+Q            +AEEDK  +
Sbjct:  437 TTGGVMTKLIPRNTPIPTRKSQIFSTAADNQPVVLIQVYEGERSMTKDNNLLGKFELTGIPPAPRGVPQIEVSFELDANGILKVSAHDKGTGKAESITITNDKGRLTQEEIDRMVAEAEKYAEEDKATR 565          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.495e-43
Identity = 86/126 (68.25%), Postives = 97/126 (76.98%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDK 380
            T GGVMT LI RNT IPTKKSQ+F+TY D Q  V IQVFEGER++TKDC LLG FDLSGIPPAPRG PQIEVTF++DANGILNV AE+KGTGK  +ITITNDKGRLS+            +  +DK
Sbjct:  408 TAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDK 533          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.495e-43
Identity = 87/129 (67.44%), Postives = 99/129 (76.74%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            TVGGVMTKLIPRNTV+PTKKSQ+ +T  D Q TV+I+V+EGER LTKD  LLG FDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   KITITND+ RL+             FAEEDK++K
Sbjct:  428 TVGGVMTKLIPRNTVVPTKKSQISSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKRLK 556          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 1.952e-43
Identity = 87/127 (68.50%), Postives = 99/127 (77.95%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GG+MTKLIPRN+ IPTKKS+VF+TY D Q  V IQVFEGER+ TKD  LLGKF+LSGIPPAPRG PQIEVTF++DANGILNV A +KGTGKS KITITNDKGRLS+            F  ED++
Sbjct:  403 TAGGIMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSNKITITNDKGRLSKEDIDKMVAEAEKFKAEDEQ 529          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 1.952e-43
Identity = 88/127 (69.29%), Postives = 97/127 (76.38%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GGVMT LI RNT IPTK++Q FTTY D Q  V IQVFEGER+LTKD  LLGKF+LSGIPPAPRGTPQIEVTF++DANGILNV A DKGTGK  KITITNDKGRLS+            +  ED+K
Sbjct:  403 TAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERALTKDNNLLGKFELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGTGKQNKITITNDKGRLSKEEIERMVADADKYKAEDEK 529          
The following BLAST results are available for this feature:
BLAST of CX289225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_YEAST2.306e-4470.08Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
GRP78_PLAFO2.306e-4469.7778 kDa glucose-regulated protein homolog OS=Plasmo... [more]
GRP78_PLAFA2.306e-4469.7778 kDa glucose-regulated protein homolog (Fragment... [more]
HSP72_CANAL6.710e-4468.50Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP71_CANAL6.710e-4468.50Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
GRP78_NEUCR8.763e-4467.4478 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP70_LEIAM1.495e-4368.25Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
GRP78_SPETR1.495e-4367.4478 kDa glucose-regulated protein OS=Spermophilus t... [more]
HSP74_YEAST1.952e-4368.50Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP70_SCHMA1.952e-4369.29Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]

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Properties
Property NameValue
Genbank descriptionC02010F02SK IF1 Citrus clementina cDNA clone C02010F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289225 ID=CX289225; Name=CX289225; organism=Citrus clementina; type=EST; length=389bp
AGACAGTTGGTGGGGTGATGACCAAGTTGATCCCAAGAAACACGGTCATT
CCAACCAAGAAATCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTAC
AGTTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGCA
GATTGCTTGGGAAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGGA
ACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAAA
TGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATCA
CAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGAGCGTATGGTTCGT
GAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAG
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